Phodopus roborovskii (desert hamster): 127220005
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Entry
127220005 CDS
T08852
Symbol
Gen1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127220005 (Gen1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127220005 (Gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
127220005
NCBI-ProteinID:
XP_051037610
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MGVNDLWQILEPVKQHIHLQDLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTQMNVKLVFVMEGEPPKLKADVMSKRTQTRYGPSGKPCSQRTGRSHFKSILRECLEM
LDCLGIPWVQAVGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTVSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLRILKGQSLLQRFNQ
WIIEPCSSIPQSAAKNVAHCSVCSHPGSPKDHERKGCTLCKSDRYCEPHDYEYCCPCEWH
QTNQNRQLNEIENNIKKKACSCKGFPFHEVIQEFLLNKDKMLKPIRYQRPDLLLFQRFTV
QKMEWPSHYACEKLLVLLTRYDMTERKLGRKNSGQLQPIRIVKPRIRNGVRCLEIEWEKP
EYYAMEDTEAGELDLLTVEEASLFEAAYPEVVAVYQKQQSETQGKKQKSKCCAGCMKVKP
KGNSLSEMDNVVSSQSLMTLKPKCEVLPKHTRKTNLEISPDPILPQESTSPSLSNLVFPE
SAPCLNLQEHFMPPPRPVAGKQTKDVSNFLVSECSEPSSSSHNISVIANLHLSTIDWEGT
SFSNSPAVQRNSLSQDLQSELESSSILPGFENTPEQCTANNEVLGRDLQKIAPEEHLLSD
ITGLYLHDLPLKERIHLKSSCPLYNVQADANLESLPLKVKSSCIIDSNSGCLSDFSKEFP
GIYLHKESKNLKVLNNQLLQENSSVDTSIPYSFDDKAVKTSLKVEPPNTVLPHNPKVDEK
TTKNLVKKSVCLKRDSSDEENDLVSWETKNTASKMKHGSQKHSLAQGRDKLRNPKVDAKE
TRLCTKSYTTAEGEENSFSDPGERTQSFLPSHKKDEDSAAYLDSPLPLCQRLKLRFQNT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacttgtggcaaattttggagcctgtaaagcaacatatccacctgcag
gatcttagtgggaaaaccattgccgttgatttgagcctctgggtatgtgaggcacagaca
gtgaagaaaatgattggaactgtcatgaagccccacctcaggaacctattttttcgtatt
tcgtacttaactcaaatgaatgtaaaactggtgttcgtaatggaaggggagccaccaaag
ctgaaagctgatgtcatgagcaagaggacacagacacgttacgggccttctggaaaacca
tgctcacagaggacagggagatcacattttaagtcaatcttacgagagtgtcttgagatg
ctagactgcctaggaatcccctgggtccaggctgtgggggaagctgaagcaatgtgtgct
taccttaatgccagtggccatgtggatggctgcctcactaatgatggtgatgcctttctt
tatggagcccagacggtttacaggaatttcaccatgaacacaaaggatccacatgttgac
tgttacacggtatcatctatcaagagtaagctaggcttggatcgagatgctctggttggt
cttgcagtacttcttggctgtgattatctaccaaagggagtgcctggagttggaaaagaa
caagcattaaaactgctgcggattttgaaaggtcaaagtttgcttcagaggtttaaccag
tggattatagaaccttgctcctctattccacaatctgcagctaaaaatgtggctcactgc
tctgtgtgttcccatccaggttcgcctaaggatcatgaacgtaaaggatgcacattatgt
aaaagtgatagatactgtgaaccacatgattatgaatactgctgtccttgtgaatggcac
cagacaaaccagaatagacaactaaatgaaatagaaaacaatattaaaaaaaaagcttgc
agttgcaaaggatttccattccatgaggtcattcaagaattccttttgaataaggataaa
atgttgaaacctatcaggtaccaaagacctgatttattactgtttcagaggtttactgtt
caaaaaatggagtggcccagtcactatgcatgtgagaagttgttggtccttttgacccgc
tatgacatgacggaaagaaaacttgggagaaagaactctggtcaactacagccaattaga
attgttaaaccccgaatcagaaatggagttcgttgtcttgaaatagaatgggaaaagcct
gaatattatgctatggaagatacagaggctggagaactggatctccttacagttgaagaa
gcatccctgtttgaagcagcctatcctgaggtcgttgctgtctaccagaaacaacagtca
gaaactcaagggaagaaacagaagagtaagtgttgtgctggctgtatgaaagttaagccc
aaaggaaacagtttatcagaaatggataatgtagtcagttctcagtcacttatgacttta
aaacctaaatgtgaagtcctccccaagcatactcgcaaaactaatttggaaatttctcca
gatcctattttaccacaggaatctacttctccctcactgagtaatttagttttccctgaa
agtgctccctgtttgaatttgcaagaacatttcatgcctcctccaagacctgtggctgga
aagcaaactaaagatgtcagtaattttctagtttcagaatgcagtgagcccagctcttca
tcccacaatatctctgtgattgctaatctacacttgagtaccattgattgggaaggtact
tcctttagtaattctccagctgttcaaagaaacagtttgtcccaagatttacaatcagaa
cttgagtcatcatccatccttcctggctttgaaaataccccagaacaatgcaccgcaaac
aatgaagtgctgggtagagatcttcaaaagattgctcctgaagaacatctactttctgac
atcactggtttatatcttcacgatttgcctctaaaggagcgaatacatttaaaatcctca
tgccctctgtataatgtacaagcagatgctaacctggaaagtttgcccctaaaagtaaaa
agttcttgtattattgacagtaactctggttgtttatcagatttctcaaaggaatttcca
ggaatatatctgcacaaagagtccaaaaacttgaaagtactaaacaaccaactccttcaa
gaaaattcttcagtggatacttccataccttattcttttgatgacaaagcagtaaagacc
agtcttaaagttgagcccccaaatactgttctacctcataatccaaaagttgatgagaaa
actactaagaaccttgtaaagaagagtgtttgcctcaagagagattcttcagatgaagaa
aatgatctagtgtcctgggaaactaagaatactgcttcaaaaatgaaacatggttctcag
aagcatagcctagcccagggcagagataaactcagaaatccgaaagtagatgctaaagaa
accagactatgcacaaagtcttacacaacagctgaaggtgaagaaaactcattctcagat
ccaggggaaaggactcagagttttctaccatctcataagaaagatgaggactctgctgcc
tacttggatagtcctctccctttatgccagaggttaaaacttaggttccagaacacttga
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