Phodopus roborovskii (desert hamster): 127220087
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Entry
127220087 CDS
T08852
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127220087 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127220087 (Trim54)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127220087 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
DUF349
CoiA_N
PHP
SpoIISA_toxin
COG2_C
DUF1421
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
FlgN
DUF5799
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127220087
NCBI-ProteinID:
XP_051037743
UniProt:
A0AAU9Z2G4
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPPLGDAHNMENLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQPGAAGEEEDDEVALEGDESNAGLEEERLDGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggtttcaagccaccgctaggggatgcacacaacatggagaacctg
gagaaacagctcatctgtcccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaatgacgtcttccaggcatctaaccct
ttgtggcaatcccggggctcctcaactgtatcttcaggaggtcgtttccgctgcccatct
tgccggcatgaggttgttctggaccggcatggggtctacggcctgcagcggaacctgcta
gtggagaatattattgacatctacaagcaggaatcctcccggccactgcactccaaggcg
gaacagcacctcatgtgtgaggagcatgaagatgagaagattaacatctactgcctgagc
tgtgaggtgcccacctgctctctctgcaaagtctttggtgcccacaaagactgtgaggtg
gctcctctgcccaccatttacaaacgccagaagagtgagctgagcgatggcatcgcaatg
ctggtggcaggcaatgaccgtgtgcaagcagtgatcacgcagatggaggaggtgtgtcag
accattgaggacaacagccgcaggcagaagcaactgttaaaccagaggttcgagaccttg
tgcgctgtgctggaggagcgcaagggcgagctgctgcaagcgctggcccgggagcaggag
gagaagctgcagcgtgtgcggggcctcatccgtcagtacggagaccacttggaggtttcc
tctaagttggtggagtccgccatccagtccatggaggagccgcagatggctctctacctc
cagcaggccaaggagctgatcaacaaggtcggggcaatgtcgaaggtggagctggcagga
cggccggagccaggctatgagagcatggagcaattctccgtgaacgtggagcacgtggcc
gaaatgctgcggaccatcgacttccaaccgggcgccgcgggggaggaagaggatgacgag
gtggctttggaaggagacgagagcaacgcagggctggaggaggaacggctggacgggcca
gaaggcctgcactga
DBGET
integrated database retrieval system
