Phodopus roborovskii (desert hamster): 127220127
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Entry
127220127 CDS
T08852
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127220127 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prob04812
]
127220127 (Spast)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
127220127 (Spast)
Membrane trafficking [BR:
prob04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
127220127 (Spast)
Cytoskeleton proteins [BR:
prob04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127220127 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
AAA_16
Mg_chelatase
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
127220127
NCBI-ProteinID:
XP_051037808
UniProt:
A0AAU9Z6V5
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All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPVSGPAPAPGSPPKRNLSHFSYPLVVGFA
LLRLLACHLGLLFVWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFHKQ
AFEYISIALRIDEEEKAGQKDQAVEWYKKGIEELEKGIAVIVTGQGEQYERTRRLQAKMM
TNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLTHA
SNSLPRSKTVMKSGSSGLSGHHRAPSCSGLSMVSGGRQGTGPAAATHKGIPKPNRTNKPS
TPTTAVQKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPS
LRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL
VRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLV
MGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD
GYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLE
AYIRWNKDFGDTTV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggccggacgacggaagaagaaaggctccggcggcgcgagcccggcgccc
gccaggcctccgccccccgccgcggtccccgcccctgtctccggcccggcccctgcgccc
ggctcgccgcctaagcggaacctgtctcacttctcgtacccgctggtcgtcggcttcgcc
ctgctgcgcctgctcgcctgccacctggggctcctcttcgtgtggctctgccagcgcttc
tcccgcgccctcatggccgccaagaggagctccgggaccgcgccggcgcctgcctcgccc
tcacccccagctcccgggccgggtggcgaggccgagagcgtccgcgtcttccacaaacag
gccttcgagtacatctctattgccctgcgcattgacgaggaagagaaagcaggacagaag
gaccaagctgttgaatggtacaagaaaggtatcgaagaactagaaaaaggaatcgctgtt
atagtaacaggccaaggtgaacagtatgaaagaactagacgccttcaagccaaaatgatg
actaatttggttatggccaaggatcgtttgcaacttctagagaagctgcaacctgttttg
cagttttccaagtcacaaacggacgtctataatgacagtactaacctgacttgtcgaaat
ggacatctccagtcagaaagtggagcagttccgaagaggaaagatcccctaacacatgct
agtaattcattgcctcgatcaaaaacagtcatgaaaagtggatcctcgggcctttcgggt
caccacagggcacctagttgcagtggtttatccatggtttctggaggaaggcagggaact
ggtcctgcagctgccacacataagggtattccaaaaccgaacagaaccaacaaaccttct
acacccacaacagctgtacagaaaaagaaagacttgaaaaattttaggaatgtggacagc
aacttggcaaacctcataatgaatgaaattgttgataatgggacagctgttaaatttgat
gatatagctggtcaggaattggcaaaacaagcactacaagaaattgttattcttccttct
ctacggcccgagttgttcacagggctcagagctcctgccagagggttgttactcttcggt
ccacctggaaatggaaaaacaatgctggctaaagcagtagctgcagaatctaatgccacc
tttttcaatataagtgctgcaagtttaacttcaaaatatgtgggagaaggagagaaattg
gtgagagctctctttgctgtggctcgagaacttcaaccgtctataatttttatagatgaa
gttgatagtcttttatgtgaaagaagagaaggggagcacgatgctagtagacgactaaaa
actgaatttttaatagaatttgatggtgtgcaatctgctggagatgacagagtacttgta
atgggtgcaactaataggccccaagagcttgatgaagccgttctcaggcgtttcattaaa
cgggtatatgtgtctttaccaaatgaggagacaagactgcttctacttaaaaacctgtta
tgtaaacaaggaagtccactgacccaaaaagaacttgcacaacttgctagaatgactgat
ggatactctggaagtgatctaacagctttggcaaaagatgcagcactgggccctatccga
gaactgaaaccagagcaggtgaagaatatgtctgccagtgagatgagaaatattcgatta
tctgacttcacagaatccttaaaaaagataaaacgaagtgtgagtcctcaaaccctagaa
gcatacatacgctggaacaaggactttggagacaccactgtttaa
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