Phodopus roborovskii (desert hamster): 127220259
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Entry
127220259 CDS
T08852
Symbol
Sox1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127220259 (Sox1)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127220259 (Sox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127220259
NCBI-ProteinID:
XP_051037954
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLTGPAGAAGGGGGGGGGGGGGGTKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGIPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgatctgcactcgcccggcggcgcccaggcgcccacg
aacctcacgggcccggccggggcggcggggggcggtggtgggggcgggggtggcggcggc
ggcgggggcaccaaggccaaccaggatcgggtcaagcggcccatgaacgccttcatggtg
tggtcccgcggacagagacgcaagatggcccaggagaaccccaagatgcacaactcggaa
atcagcaagcgcctgggggccgaatggaaggtcatgtccgaggctgagaaaaggccgttc
atcgacgaggccaagcggctgcgcgcgttgcacatgaaggagcacccggattacaagtac
cggccgcgccgtaagaccaagacgttgctcaagaaggacaagtactcgctggccggtggg
ctgctggcggccggcgcaggtggcggtggtgcggccgtggccatgggcgtgggcgtgggc
gtcggggcggcggccgtgggccagcgcctggagagccctggtggcgcggcgggaggcggc
tacgcgcacgtcaacggctgggcaaacggcgcctaccccggctcggtagccgcggcagcc
gcggccgcagccatgatgcaggaggcacagctagcctacgggcagcaccccggcgcgggc
ggcgcgcacccgcacgcgcacccggcgcatcctcacccgcaccatcctcacgcgcatcct
cacaacccgcagcccatgcaccgctacgacatgggcgcactgcagtacagccccatctcc
aactctcagggctacatgagcgcgtcgccttcgggctacggcggcatcccctacggcgcc
gcagccgccgccgccgcagctgctggcggcgcgcaccagaactcggctgtggcggccgcg
gcggctgcagcggcagcatcctcgggtgccctaggcgccctgggctcgctagtcaagtca
gagcccagcggcagtccgccggcccccgcgcactcgcgggcgccgtgcccgggggacctc
cgcgagatgatcagcatgtacctgcccgctggggagggtggcgacccggcggcggcagcg
gctgccgcggcccaaagccggctgcactcgctgccacagcactaccaaggcgcgggcgcg
ggcgtcaacggcacggtgcccctgacgcatatctag
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integrated database retrieval system
