Phodopus roborovskii (desert hamster): 127220319
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Entry
127220319 CDS
T08852
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127220319 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127220319 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127220319 (Vps36)
Membrane trafficking [BR:
prob04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
127220319 (Vps36)
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127220319 (Vps36)
Exosomal proteins of colorectal cancer cells
127220319 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
Xre-like-HTH
BBL5
Motif
Other DBs
NCBI-GeneID:
127220319
NCBI-ProteinID:
XP_051038055
UniProt:
A0AAU9Z5H9
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPPPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENVPVSQSLQTNKGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDVTEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
VRLRVFDSGVMVIELQTHREEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagacgctggtgatccag
cagcgtggggtgcgcgtctacgacggcgaggagaagataaaattcgatgctgggactctt
cttcttagtacacaccggctgatttggagagaccaaaaaaacaatgagtgctgcatggcc
attcctctgtcccaggtcgtgtttattgaggaacaggcagctgggattgggaagagtgcc
aaaattgtggttcatctgcatccccctccgtccaacaaagagcctggtccattccagagc
agtaagaactcctacatcaaactctccttcaaagagcatggccagattgaattttatagg
cgtttgtcagaggagatgacacagagaagatgggaaaatgtgccagtttcccagtcatta
caaacaaataaaggaccccagccaggaagagtaagagctgtaggaattgtaggtatcgaa
aggaaacttgaagagaaaagaaaagaaactgacaaaaacatttctgaggcctttgaagat
cttagcaagcttatgattaaggctaaggaaatggtggaattatcaaaatcaattgccaat
aagattaaagagaaacaaggcgatgtcacagaagatgaaaccatcaggtttaagtcctac
ttgctgagtatgggaatagccaacccagttaccagggaaacctatggctcaggcacacag
taccacatgcagctagccaaacagctggctggaatattgcaggcacctttagaggaacgt
gggggaataatgtcactcacagaggtgtactgtttagtgaaccgagcccgaggaatggaa
ttgctctcaccagaagatttagtgaatgcatgcaagatgctggaagccctgaaattacct
gtcaggcttcgggtgtttgacagcggtgtcatggtaattgagcttcaaacccacagagaa
gaggagatggtggcctcagcactagagacagtttcagaaaggggatccttaacatcagaa
gagtttgccaaacttgtggggatgtctgtcctcctggctaaagaaaggctgctactcgca
gagaagatgggccatctttgccgagatgactccgtggaaggcttgcggttttacccaaat
ttatttatgacacagaactaa
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