Phodopus roborovskii (desert hamster): 127220334
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Entry
127220334 CDS
T08852
Symbol
Alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
prob03040
Spliceosome
prob05014
Amyotrophic lateral sclerosis
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127220334 (Alyref)
09122 Translation
03013 Nucleocytoplasmic transport
127220334 (Alyref)
03015 mRNA surveillance pathway
127220334 (Alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127220334 (Alyref)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127220334 (Alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127220334 (Alyref)
03041 Spliceosome [BR:
prob03041
]
127220334 (Alyref)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127220334 (Alyref)
TREX complex
127220334 (Alyref)
Spliceosome [BR:
prob03041
]
Complex C
Other components
EJC/TREX
127220334 (Alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127220334 (Alyref)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
127220334
NCBI-ProteinID:
XP_051038083
UniProt:
A0AAU9YN26
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAAARVNRGGGPLRNRP
AISRGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSINRGGMTRNRGSGSFGGGGTRRGTRGGSRGRGRGTGRNSKQQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtccctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgcggcggt
gcggtgcaggccgccgccgcgcgggtgaaccgaggcggcgggcctctgaggaaccggccc
gccatctctcgcggcgctgcaggcggcggcaggaaccggccggcaccgtacagcaggccg
aagcagcttccagacaagtggcagcacgatctgttcgacagcggcttcgggggtggagcc
ggcgtggagacgggaggaaagctgctggtgtcaaaccttgacttcggggtgtcagacgcc
gatattcaggagctcttcgctgagtttggaacgctgaagaaggcagctgtgcactacgac
cgctctggacgaagtttagggacagcagatgtgcactttgaacgcaaggcagacgcccta
aaggccatgaaacagtacaacggtgtccccttggatggccgtcccatgaacatccagcta
gtcacatcacaaatcgatacgcaaagaagacctgcacagagcataaacagaggtggcatg
acaagaaaccgtggctctggaagttttggtggtggtggcacccggagagggacccgtgga
ggcagccgtggaagaggtagaggtaccggaagaaactcaaagcagcagcagctttctgcg
gaggagttggatgcgcagctggatgcatataatgcaaggatggacaccagttaa
DBGET
integrated database retrieval system