Phodopus roborovskii (desert hamster): 127220587
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Entry
127220587 CDS
T08852
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prob01009
]
127220587 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127220587 (Sh3rf1)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127220587 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
prob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127220587 (Sh3rf1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127220587 (Sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
127220587
NCBI-ProteinID:
XP_051038423
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
EELPSNILLVRLLDGIKQRPWKPGPGGGSGTNCTNALRAQGSTVANCGSKDLQSSQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPVPVDTAECPSATAQSSTGQKHSDTKKNTRK
RHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIST
TGLIVTPPPSSPVTTGPSFTFPSDVSYQAALGTMNPPLPPPPLLAATVLASTSGASAAAV
AAAAAAGVGPRPVAGSADQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMFLVFERC
QDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVSMSSAGQANRGVTMVSPSTAGG
PTQKLQGNGVAGNPSMVPTAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQ
ERPTAAVTPIQVQNAACLGPASVGLPHHSLASQPLPPMAGPAAHVAAISINRTNAPLACA
AGTSLASANMTTATLETEPSGRTVTILPGLPTSPDSGAATCGSTSAVKPDKDSKKEKKGL
LKLLSGASTKRKPRVSPPASPTLDMELGAGEVPLQGAVGPELPLGGGHGRAGSCPTDGDG
PVVSGTASLAQDAFHRKASSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERHRVVVSYP
PQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgccttgttggaccttctggagtgccctgtatgtctagaacgcctggat
gcttctgccaaggtcttaccttgccagcacacattttgcaaacgatgtttgctggggatc
gtgggatcccggaatgaactcagatgtcctgagtgccggactcttgttggttctggtgtt
gaggagctccccagtaacatcttactggtcagacttctggatggcatcaagcagaggcct
tggaaacctggccctggtgggggcagtgggaccaactgcacaaatgcattaagggctcag
ggcagcactgtggctaattgtggctcaaaagatctgcagagctcccagtgtggacagcag
cctcgggtgcaagcctggagtcccccagtgaggggtatacctcagttaccatgtgccaaa
gcattatataactacgaaggaaaagagcctggagaccttaagttcagcaaaggcgacatc
atcattttgcgaagacaagtggatgaaaattggtaccatggggaagtcaacggggtccac
ggctttttccccaccaactttgtgcagatcatcaaacctttacctcagcccccacctcag
tgcaaagcactttacgactttgaagtgaaagacaaggaggctgacaaagattgccttccc
ttcgcaaaggatgacgtactgacggtgatccgcagagtggatgaaaactgggctgaggga
atgctggcagacaaaataggaatatttccaatttcatatgttgagtttaactcagctgcc
aagcagttgatagagtgggataagcctcccgtgccagtagacactgcagaatgcccatct
gcaacagcacagagcagcactggccagaagcactctgacaccaagaagaacaccaggaag
cgacactccttcacctccctcaccatggccaacaagtcttcccaggcatcccagaaccgc
cactccatggagatcagccctcccgtgctcatcagttccagcaaccccacagccgctgcc
cgcatcagcgaactgtctggactctcctgcagcgccccatctcaggttcatataagcacc
actgggttaattgtgaccccacccccaagcagccctgtgacaactggcccttccttcaca
ttcccgtcagatgtctcctaccaagctgcccttggaactatgaaccctcctcttccccca
ccccctctcctggctgccactgtccttgcctccacatcaggcgcttctgctgctgctgtt
gctgctgctgctgctgctggagtgggacccaggcctgtggcgggatccgctgaccagatt
gcacatttacggccccagactcgccccagtgtgtatgttgctatatacccatacactccc
cggaaagaagacgagctagagttgagaaaaggagagatgtttttggtgtttgagcgttgc
caggatggctggttcaaagggacatcgatgcacaccagcaagataggtgttttccccggc
aactacgtggctccagtcacaagggcggtgacaaatgcctcccaagctaaagtctctatg
tcttctgcgggccaggcaaatcggggggtgactatggtcagtccttcgactgcaggagga
cctacccagaagctccaaggaaatggtgtggctgggaatcccagcatggttcccacggct
gtggtatcagcagctcacatccagacaagtcctcaggctaaggtcctgctgcacatgact
gggcaaatgacagtcaaccaggcccgcaatgctgtaaggacagttgcagcacataaccag
gaacggcccacagcagcagtgacacccatccaggtccagaatgccgcctgcctcggacct
gcatccgtgggcctgccccatcattcactggcctctcagcctctgcctccaatggcaggc
cctgctgcccatgttgctgctatcagcatcaatcgaaccaatgctcccctggcctgtgct
gcaggcacttctctggcctccgcaaacatgaccactgccactttggagacagaacccagt
ggccgaacagtgaccatcctccctggactccccacgtctcccgacagtggtgcagcaaca
tgtgggagcacgtcagctgtgaaaccagacaaggacagtaagaaagaaaaaaaaggtcta
ctgaagcttctgtctggggcctccaccaaacgcaagcccagagtctcccctccagcgtca
cctaccctggacatggagctgggtgcaggggaggtgcccttgcagggagcggtgggtcct
gagttgccactagggggcggccatggccgggcaggctcctgccccacagatggagatggc
ccagtggtctctgggacagcatccttagcccaggatgctttccatcgcaaggcaagctcc
ctggactccgcagtgcccatcgctcctccacctcggcaggcctgctcctccctgggtccc
gtcatgaatgaggctaggcctgttgtttgtgaaaggcacagggtggtggtttcctatcct
cctcagagtgaggcagaacttgaactcaaagaaggcgatattgtgtttgttcataaaaag
cgtgaggatggctggttcaaaggcacgttacaaagaaatgggaagacgggccttttcccg
gggagctttgtggaaaacatctga
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