Phodopus roborovskii (desert hamster): 127220628
Help
Entry
127220628 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: PC4 and SFRS1-interacting protein-like
KO
K25057
PC4 and SFRS1-interacting protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127220628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127220628
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127220628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
DUF3916
Motif
Other DBs
NCBI-GeneID:
127220628
NCBI-ProteinID:
XP_051038478
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MTRDFKPGDLIFAKMKGYPHWPARADEVPDGAVKPPTNKLPIIFFGTHETAFLGPKDIFP
YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQASTKQSNASSDVEVKEKETSVSKE
DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVESEEAGMVAAATASANLKASPKR
GRPAVTEVKIPKPRGRPKVVKQPCPSESDMVIDEDKSKKKKKKKKGPEEKQPKKQLKKEE
ESQKEEDKSRKEPDKKEGKKEVESKRKNLAKPGVTSTSDSEDEDDQEGEKKRKGGRNFQT
AHRRNLLKGQHEKEAAERKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIH
AEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEIITTLKKIRRFKVSQVIMEKS
TMLYNKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGSK
TLNGGSDTQDSSHPQHNGDSNEESKDSHKASSKKKSSGEEREAKLSLKESPLDN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgatttcaaacctggagacctcatcttcgccaagatgaaaggttatcctcat
tggccagctcgagcagatgaagttcctgatggagctgtgaaaccacccacaaacaaacta
cccattatcttttttggaacccatgagactgcttttttaggaccaaaggacatatttcct
tactcagaaaataaggagaagtatggcaaaccaaataaacgaaaaggtttcaatgaagga
ttatgggagatagataacaatccaaaagtgaaattttcaagtcaacaggcatcaactaaa
caatcaaatgcatcatctgatgttgaagttaaagaaaaagaaactagtgtttcaaaggaa
gatactgatcatgaagaaaaagccagcaatgaagatgtgactaaagcagtcgacataacc
actccaaaagctgccaggcgaggaagaaagagaaaggctgaaaaacaagtggaaagtgaa
gaagcaggaatggtggctgcagcaacagcttctgctaacttgaaagcaagtcctaagaga
ggacgacctgcagttactgaagtcaagattccaaaaccaagaggcagacctaaagtggta
aaacagccttgtccttcagagagtgacatggttattgatgaagacaaaagtaaaaaaaaa
aaaaaaaaaaaaaaagggccagaggaaaaacaacctaaaaagcagcttaaaaaggaagaa
gaaagtcaaaaggaagaggataagtcaagaaaagaaccagataagaaagaggggaagaaa
gaagtggaatctaaacggaaaaatttagctaaaccaggggttacatcaacctctgattca
gaagatgaagatgatcaagaaggtgaaaagaagagaaagggtggaagaaacttccagact
gctcacagaaggaacttgctgaaaggccaacatgagaaagaagctgcagagcggaaacgc
aagcaagaggaacaaatggaaactgagcagcagaataaagatgaaggaaagaagccagaa
gttaagaaagtggagaagaagcgagaaacatcaatggattctcgacttcaaaggatacat
gctgaaattaaaaattcactcaaaattgataatctagatgtgaacagatgcattgaggca
ctggatgaacttgcttcacttcaggtaacaatgcagcaagctcagaaacacacagagatc
atcacaaccctgaagaaaatacggcggttcaaagttagtcaagttatcatggaaaagtct
acaatgttatataacaagtttaagaacatgtttttggttggtgaaggagattcagtcatc
acccaagtgctgaacaaatcccttgctgaacaaagacagcatgaggaagcaaataaaacc
aaagatcaagggaagaaagggccaaacaaaaagctagaaaaggaacaaacaggttcaaag
accttaaatggaggatctgacactcaagacagtagtcatccacaacataatggtgacagt
aatgaagaaagcaaagacagccacaaggccagcagtaagaaaaagtcatctggagaagag
agagaggctaaattatctctgaaggaatcaccactagataactag
DBGET
integrated database retrieval system
