Phodopus roborovskii (desert hamster): 127221071
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Entry
127221071 CDS
T08852
Symbol
Cpsf4l
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03015
mRNA surveillance pathway
prob05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127221071 (Cpsf4l)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127221071 (Cpsf4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127221071 (Cpsf4l)
03019 Messenger RNA biogenesis [BR:
prob03019
]
127221071 (Cpsf4l)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127221071 (Cpsf4l)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127221071 (Cpsf4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Torus
zf-CCCH
zf-CCCH_3
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
127221071
NCBI-ProteinID:
XP_051038937
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MEEIIAGLAEITFAFEQDVELQRGTGLLPFQGMDKSNSAVCNFFAKGLCEKGMLCPLRHE
KGEKMVVCKHWLRGLCRKGDCCSFLHQYDVDRMPVCYFHSKFGNCSNKDCSFLHVKPAPK
LQDCPWYDQGFCKDVGPLCKYRHVHQVMCLNYFTGFCPEGPKCQFGHWRSSSKYLPSDFH
CPANDSAPHPTPQPLDAVGRVDSSPSLLNSTHNGAGRLSTSAGIQRLQLFPTEGRFPGKV
CGPPSEEMGLASCLPNLHQK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatcatcgcggggctggcagagatcactttcgcctttgagcaggatgtggaa
ttgcagagaggcactgggctcctgcctttccagggcatggacaagtccaactcagctgtg
tgcaacttcttcgctaaagggctgtgtgagaaagggatgctgtgcccgcttcggcacgag
aagggcgagaagatggtggtgtgcaaacactggctgcgggggctctgccgaaaaggggac
tgctgtagcttcctgcaccagtatgacgtggacaggatgcccgtgtgctatttccactcc
aagttcggtaactgcagtaataaggactgctctttcctccacgtgaagccagctcccaag
ctccaggactgcccttggtatgaccaagggttctgcaaggacgtaggtcccctgtgtaaa
taccgccatgtccatcaagtaatgtgtctcaactacttcaccggcttctgccccgaggga
cctaagtgccaatttgggcactggagatcatctagcaagtatctgcctagtgattttcac
tgccctgctaacgactccgcgccccaccccaccccccagcctctggatgctgttggccgg
gtggactccagcccctccctcttgaacagcactcacaatggggcaggcaggttgtcaacc
agcgcagggatccagcgactccagctttttccaacagaaggccgcttcccaggcaaagtc
tgtggtccaccatcagaagagatgggactagcctcctgcctgcccaatctgcaccagaag
taa
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