Phodopus roborovskii (desert hamster): 127221449
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Entry
127221449 CDS
T08852
Symbol
Ebf4
Name
(RefSeq) transcription factor COE4 isoform X1
KO
K09103
early B-cell factor
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127221449 (Ebf4)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127221449 (Ebf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
127221449
NCBI-ProteinID:
XP_051039353
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MARARGQAPGSGGRRRPRRGSPGTGPRGESAGLLLLLLQVLPPGAAAGPGRRGTRGPGGG
CVCWPGAGPALPRDARLLLLLPPLPPPSPPPSSTAAASPSRMDALPRGGLHLKEEPLLPS
SLGSVRSWMQSAGILDSSTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLAMYDRQGQPV
EVERTAFIDFVEKDREPGTEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMSKQAIIYE
GQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNA
GNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGQDSRPSPGHP
QSPPSCSPLTWVLSYLPAATPCIKAISPGEGWTTGGATVIIIGDNFFDGLQVVFGNVLLW
SELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQK
VIPRHPGDPERLPKEVLLKRAADLAEALYGVPSSNQELLLKRAADVAEALYSAPRAPAPL
GPLAPSHPHPAVVGINAFSSPLAIAVGDATPEPGYARSCGSASPRFAPSPGSQQSSYGSG
LGAGLGSYGAPGVTGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSV
FSFSPVNMISAVKQRSAFAPVLRPPSSPSQACPRAHREGLPDQPFEDTDKFHSAARGLQG
LAYS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccagggcccgcggccaggccccggggagcggcgggcggcggcggccgcggcgggga
agcccggggaccgggccccggggggagtcggccggtctgctgctgctcctgctgcaggtg
ctgccacccggggcagcggcaggcccggggcgccgcggcactcgggggcctggcggcggc
tgtgtctgctggcccggcgccggcccggctcttccccgggacgcgcgactgctgctgttg
ctgccgcccctgccgccaccgtcgccgccgccgagctctacggccgcagcctccccctct
cggatggacgctctgccccgcggtgggctccacctgaaagaggagccgctactgccctcc
agcctgggctccgtgcgctcctggatgcagagcgctggcatcctggactccagcaccgcg
gcacagagtggcgtgggcctggcaagagcacattttgaaaagcagcccccctccaacctc
aggaagtccaacttcttccacttcgtgctggccatgtacgaccggcaggggcagcccgtg
gaggtggagcgcacagccttcatcgacttcgtggaaaaggatcgagaacctgggacagaa
aagacaaacaatgggatccattaccgccttcggctggtgtataacaatggactccggaca
gagcaagacctctatgtgcgcctcattgactccatgtcaaagcaggctatcatctatgag
ggacaggacaagaaccctgaaatgtgccgggtgctgctcactcacgagatcatgtgcagc
cggtgctgtgaccgcaagagctgtgggaaccggaatgagacaccctcagatccagtcatt
attgacaggttcttcctcaaattctttctcaaatgcaaccagaactgcttgaagaatgca
gggaatccccgagacatgcgccgcttccaggtggtggtgtccacgacagtgagtgtggat
ggacacgtgctggctgtgtctgacaacatgtttgtccacaacaattccaaacatggccgc
agggctcgacgcctggacccatctgaaggtcaggactcccggcccagccctggtcatcct
cagtctccaccttcgtgcagtcccctgacctgggtcctctcctacctcccagctgccacc
ccctgcatcaaggccatcagccccggggagggctggaccacgggaggcgccaccgtcatt
atcatcggagacaacttcttcgacgggttgcaggtcgtgtttggcaacgtgctcctgtgg
agcgagctcatcactccccatgctatccgggtgcagacaccaccaagacacatccctggg
gtagtagaagtgaccctctcctacaagtccaagcagttttgtaaaggagcccctggccgc
tttgtctacacagccctgaatgagcctaccattgactacggtttccagaggctacaaaaa
gtcattcccagacaccctggggaccctgagaggctgcccaaggaagtgctgctgaagcgg
gcggctgacttggcggaggccctgtatggagtgcccagcagcaaccaggagctcctcctg
aagcgtgcagcagacgtggccgaggctctctacagcgccccgcgcgcaccggcacccctc
ggacctctggcccccagccacccacaccccgccgtcgtgggcatcaacgccttcagcagc
cctttggccatcgccgtcggggatgccacacctgagccgggctatgctcgcagctgcggc
agcgcgtcgccccggttcgcgcccagcccagggtctcagcagagcagctacggcagtggc
cttggagctggccttggcagctacggtgctccgggtgtgactggcctcggcgtgcctggg
tcccctagcttcctcaatggctccaccgcaacctcacctttcgccatcatgccctctagc
cccccgctggcggctgcctcctccatgtccctcccggccgctgcccccaccaccagcgtc
ttctccttctcgcctgtcaacatgatctccgctgtcaaacagaggagcgccttcgcccct
gtgctgcgcccacccagctccccatcccaagcctgccccagagcccacagagaggggctt
ccagaccagccttttgaagatactgacaagttccactctgcagcccggggactccagggc
ctggcatactcttaa
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