Phodopus roborovskii (desert hamster): 127221456
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Entry
127221456 CDS
T08852
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127221456 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127221456 (Polr1b)
Enzymes [BR:
prob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127221456 (Polr1b)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127221456 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF7757
Motif
Other DBs
NCBI-GeneID:
127221456
NCBI-ProteinID:
XP_051039364
UniProt:
A0AAU9Z5D7
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDLEGRWRNLPSGPSLKHLTDPSYAILPEQQKAALQDLTRAHVDSFNYAVLEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPSVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGVSKGVIKQFLGYVPIMVKSKLCNLYNLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKSRGLGYTHFGVSMHCVKEEHSAVNMNLHYVENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELTKGKEEDSFFKNSVSQMLRSVMEEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEEAAKFLFTECICIHLKSDTEKFYLLCLMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMENWLVSIKIALDKRAQKTNVSINNENLLKIF
SMGTELTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTAICEVVTKFVYTASVPALLCGLGVT
PVDATPCRPYSDCYPVLLDGVMVGWVDKELAPDVADTLRRFKVLREKRIPPWMEVALVPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNVAIFEDEVFSGISTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQERSDNKLYRLQTPQSP
LVRPCMYDYYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKFKQGDNNLVFGVKPGDPRVMQKLDDDGLPFIGAKLQFGDPYYSYLNLNTGEGFVVY
YKSKENCIVDNIKVCSNDTGSGKFKCICITIRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEEHSALG
HFGEMLKAAGYNFYGTERLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaaggccggtggcggaacctgcccagcgggcccagcctaaagcacttgacc
gacccctcgtatgcaattctcccggagcagcaaaaggcggcgttgcaagacttgacgcgg
gcgcacgtggactctttcaactacgcggtgctggaggggctgagccacgcggtgcaggcc
atacctccctttgaatttgctttcaaagatgagcgcatatctcttactattgtggatgct
gtcatcagtccaccctcagtgcccaaagggaccatctgcaaagagctcaatgtctatcca
gcggaatgccggggccgaaggagcacctaccgtgggaagctgacggctgacatcagctgg
gcagtgaatggagtctccaaaggtgtcattaaacagtttcttggctatgttcccatcatg
gtaaagtctaaactttgcaacttatacaaccttcctcctcaagccctcattgaacaccat
gaggaggcagaggaaatgggaggttattttataatcaacggcattgaaaaagtcatccga
atgttgataatgcctcggagaaatttcccaattgcgatgataagaccaaagtggaaaagc
agagggcttggctacactcatttcggggtttcaatgcactgtgtgaaagaagaacactcc
gctgtcaatatgaaccttcactatgtggagaacggcacagttatgctgaactttatttac
cggaaagagctctttttccttcctttgggatttgcccttaaggcacttgtgagcttttca
gattatcagattttccaggaacttaccaaaggcaaagaggaggactctttttttaagaat
tctgtttctcagatgttgaggtctgtgatggaagagggttgctctacccagaagcaggtc
cttaactatctgggtgaacgcttcagagtaaagctcagtcttcctgactggtacccgaat
gaggaagctgccaagttcctgttcactgagtgcatctgtatccacttgaaatctgatact
gagaagttttacctgctttgcctcatgacccggaagctctttgctttagccagaggagag
tgcatggaggacaaccctgatagtctagtgaaccaagaagtccttacccctggtcagctc
ttcctgatgtttctgaaggaaaaaatggaaaattggctagtgtctattaaaatagcttta
gacaagagagctcagaagaccaatgtatcgataaacaatgaaaatttgctgaagatattt
agtatgggaacagagctaacaagaccatttgaatatcttcttgctactgggaatctgcgt
tcgaaaacaggtctcggcttcctacaagattctggcctgtgtgttgtggctgacaagttg
aacttcattcgctatctctcccatttccgctgtgtgcacagaggggccgactttgccaag
atgaggaccaccacagtgcgcaggctgctgccagagtcctggggcttcctctgccctgtg
cacaccccagacggggcaccgtgtgggctgctgaaccacctgactgccatatgcgaggtc
gtcacgaagtttgtgtacacagcgtctgttccagccttgctctgtggcttaggagtcact
cctgttgacgccacaccttgccgaccgtacagtgactgctaccctgtcctgctggacggt
gtcatggtgggctgggtggacaaggagcttgctcctgacgttgcagacactctccgtcgc
tttaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctggttcccatg
acaggaaaaccaagcctctacccagggttgttccttttcacgactccctgccggctggtg
aggcctgtgcagaacttggaactgggcaaagaagaactcattggcactatggagcagctc
ttcatgaacgttgccatttttgaggatgaggttttttccgggatttccacacaccaggag
ctgttccctcacagcctgctgagcgtgatcgccaacttcatccccttctctgatcataac
cagagtcctcggaacatgtaccagtgccagatgggtaagcagaccatgggcttcccactg
ctcacttatcaagagcgatcagataataaactctaccgccttcagacaccccaaagccct
ctagtgaggccatgcatgtatgactattacaacatggacaactatccgattgggacaaat
gccattgtagctgtaatctcctacactggctatgatatggaagatgctatgattgtgaat
aaggcttcttgggagcgaggctttgctcatggaagtgtctacaagtctgagttcatagac
ctctctgaaaaatttaagcaaggggacaataaccttgttttcggagtcaaacctggtgac
cctagggttatgcagaagttggatgatgatggattgcctttcataggagcaaagctgcaa
tttggtgacccctactacagctacctaaaccttaacactggggaaggtttcgtggtttac
tataagagtaaagaaaattgtattgtggacaacatcaaagtgtgtagtaatgacacgggc
agtgggaaattcaaatgtatctgcatcacaatacgagttcctcggaatccaactattgga
gataaatttgccagccgtcacggacagaagggcattttgagcagactgtggccagctgag
gacatgccttttacagagagtgggatggtgccagacattctgtttaatcctcatggattt
ccctcccgtatgaccatcggtatgttaattgaaagcatggctggaaagtctgcagctttg
catggtctctgccatgacgctacacccttcatcttctccgaggagcactcggccttaggg
cactttggggagatgttaaaggctgccggctacaacttctatggcaccgagagattatac
agtggcatcagcgggatggagttggaagcagatattttcattggtgtggtttattaccag
cgtttacgccacatggtgtcagacaagtttcaagttagaaccactggagccagggacaaa
gtcaccaaccagcctatcgggggaaggaatgtccagggtggaatccgctttggcgaaatg
gagcgggatgctctattggcacacggtacatcctttctccttcatgatcggctcttcaac
tgctcagaccgctcggtcgcccacgtatgtgtgaaatgtggcagtttgctgtccccgcta
cttgaaaagcctcctccttcttggtcagctatgcgcaacagaaaatacaactgcactgtc
tgtggtcgcagtgataccattgacactgtctctgtgccgtatgtttttcggtattttgta
gctgagctggcggctatgaacatcaaagtaaaactggatgtcatttaa
DBGET
integrated database retrieval system
