Phodopus roborovskii (desert hamster): 127221592
Help
Entry
127221592 CDS
T08852
Symbol
Capn3
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127221592 (Capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127221592 (Capn3)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
127221592 (Capn3)
Peptidases and inhibitors [BR:
prob01002
]
Cysteine peptidases
Family C2: calpain family
127221592 (Capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127221592
NCBI-ProteinID:
XP_051039588
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MPTVISATVAPRTGAEPRSPGPGPHPAQGKTTEAGGGHPSGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPSDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDKSLLR
DSDLDPRGSDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKNK
PIIFVSDRANSNKELGVDQEAEEGKDKAGPDKQGENPQARPGHTDQETEEQQQFRNIFRQ
IAGDDMEICADELKNVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHL
WKKIKAWQKIFKRYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgtcattagtgcaacggtggccccgaggacaggggctgagcccaggtcccca
gggcctggtcctcacccagcccaagggaagaccaccgaagctggaggtggacacccaagt
ggcatctactcggccatcatcagccgcaatttcccaattatcggagtgaaagagaagacc
tttgagcagctccacaaaaagtgcctggagaagaaagttctttatctggatccggagttc
ccgccagatgaaacctctctcttttatagccagaagttccccatccagtttgtctggaag
agacctccggaaatttgtgagaatccccgatttatcattggtggagccaacaggactgac
atctgccaaggagacttaggggactgctggtttcttgcagccatcgcctgcctgaccctg
aacgagaggctgcttttccgagttataccccatgatcaaagtttcactgaaaactatgca
gggatcttccacttccagttctggcgctatggagactgggtagatgtggtcattgatgac
tgtctgccaacatacaacaatcaacttgttttcaccaaatccaaccaccgcaatgaattc
tggagtgctctgctggagaaagcttatgctaagctccacggttcctatgaagctctaaaa
ggtgggaacaccaccgaggccatggaggacttcacaggaggggtgacagagttttttgag
atcaaggatgctcccagtgatatgtacaagatcatgaggaaagccatcgagagagggtcc
ctcatgggctgctccattgatgatggcacgaacatgacttacggaacctctccttctggt
ctgaacatgggggagttgattgcgcggatggtgagaaatatggataagtcgctgctcaga
gactcagacctcgaccccaggggctcagatgacagaccatcaaggacgatcgttcctgtg
caatatgagacaagaatggcctgtgggctggtgaaaggtcatgcctattcagtcactggg
ctggaggaggccctgttcaaaggtgagaaggtgaagctggtgcggctacggaacccctgg
ggccaggtggagtggaacggctcttggagtgatggttggaaggactggagctttgtggac
aaagacgaaaaggcccgtctacaacaccaggtcactgaagatggagagttctggatgtca
tatgatgactttgtctaccatttcacaaagctggagatctgtaacctcacagctgacgcc
ctggagtctgacaagctgcagacctggacagtgtccgtaaacgagggccgctgggtgagg
ggctgttctgctggaggctgccgcaacttcccagacactttctggaccaacccacagtac
cgtctaaagctcctggaggaggacgatgaccctgatgactctgaggtcatctgcagcttc
ctggtggccctgatgcagaagaatcggcgaaaggaccggaagctgggagccaacctcttc
accatcggcttcgcgatctacgaggttcccaaagagatgcacgggaataagcaacacctg
cagaaggacttcttcttgtacaatgcctctaaagccagaagcaaaacctacatcaacatg
cgggaagtgtcccagcgcttccgcctgccccccagtgagtacgtcattgtaccttccacc
tacgagccccatcaggagggggaattcatcctccgggtcttctctgaaaagaggaatctc
tctgaggaagctgagaacacaatctccgtggatcggccagtgaaaaagaaaaaaaataag
cccatcatctttgtttcagacagagcaaacagcaacaaggagctgggtgtggaccaggag
gcagaggagggcaaagacaaagcagggcccgataagcaaggggaaaacccacaggcacgg
cctggccacacagaccaggagactgaagagcagcaacagttccggaatatcttcaggcag
atcgcaggcgatgacatggagatctgtgcagatgaactcaagaatgtacttaacacggtg
gtgaacaaacacaaggacttgaagacacaggggttcacactggagtcttgccgaagcatg
atagctctcatggatacagatggctctggacggctgaatctgcaagagttccatcacctc
tggaaaaagatcaaggcctggcagaaaatcttcaaacgctatgacacagatcattctggc
accatcaatagctatgagatgcggaatgcagtcaatgatgcaggcttccacctcaacagc
caactctatgacatcatcaccatgcgctacgcagacaaacacatgaacatcgactttgac
agtttcatttgctgcttcgtcaggctggaagggatgttcagagcttttaacgcatttgac
aaggatggagatggcatcatcaaactgaatgttcttgagtggctgcagcttaccatgtat
gcctga
DBGET
integrated database retrieval system
