Phodopus roborovskii (desert hamster): 127222205
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Entry
127222205 CDS
T08852
Symbol
Lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04360
Axon guidance
prob04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127222205 (Lrrc4c)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127222205 (Lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127222205 (Lrrc4c)
Cell adhesion molecules [BR:
prob04515
]
Immunoglobulin superfamily
NGL family
127222205 (Lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
127222205
NCBI-ProteinID:
XP_051040071
UniProt:
A0AAU9Z681
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLMPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcaactccttgtggtggctggt
ctggttcgagctcaaacctgcccttcggtgtgctcctgcagcaatcagttcagcaaggtg
atttgtgttcgaaaaaaccttcgtgaggtccctgatggcatctccaccaacacaaggctg
ctgaaccttcatgagaaccaaatccagatcatcaaagtgaacagcttcaagcacttaagg
cacttggaaatcctccagttgagcaggaatcacattcgaaccatcgaaattggggcgttc
aatggtctggcgaacctcaacactctggaactctttgacaatcgtcttaccaccatccca
aatggagcctttgtgtacttgtctaaactgaaggagctctggttgcgcaacaaccccatt
gaaagcatcccttcctatgcttttaacagaatcccgtctttgcgtcgcctagacttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtctaacttgagg
tatttgaaccttgccatgtgcaacctccgcgaaatccctaacctcacgccactcatcaaa
ctggacgagctggatctttctgggaaccatttatctgcaatcaggcctggctcttttcag
gggttgatgcaccttcagaaactgtggatgatacagtctcagattcaagtgattgaacgc
aatgcctttgataacctccagtcactagtggagatcaacctggcacacaacaatctaaca
ttattgcctcatgatctcttcacacccttgcatcatctagagaggatacaccttcaccac
aacccatggaattgtaactgtgatatcctgtggctcagttggtggataagagacatggcc
ccctcaaacacagcttgttgtgccaggtgtaacactccccccaatctgaaagggaggtac
atcggagagctggaccagaattacttcacatgctatgctccagtgattgtggagccccct
gcagacctcaatgtcactgaaggcatggcagctgagctgaaatgtcgggcatctacatcc
ctgacttctgtgtcttggattactccaaatggaacagtcatgacccacggggcatacaaa
gtgcggatagctgtgctcagcgatggcacgttaaatttcacaaatgtcactgtgcaagac
acaggcatgtatacatgtatggtgagtaattctgttggcaacacgactgcttctgccacc
ttgaatgttactgcggcaaccactactcctttctcctacttttcaactgtaacagtagag
actatggaaccttctcaggatgaggcacgaaccacagataacaatgtgggcccaacccca
gtgatcgactgggagaccaccaatgtgaccacatctcttatgccacagagcacaaggtcg
acagagaaaacattcaccatcccagtaactgacattaacagtggaatcccaggaattgat
gaggtcatgaaaacaaccaaaatcattattgggtgttttgtggccatcacactaatggct
gctgtgatgctggtcattttctacaagatgaggaaacagcaccatcggcaaaaccaccat
gctccaacaaggactgttgaaatcattaacgtggatgatgagctcactggggacaccccc
atggaaagccacctgcccatgcctgccattgagcatgagcacctaaaccattataactct
tacaaatctcccttcaaccacacaacaacagtaaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcaaata
taa
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