Phodopus roborovskii (desert hamster): 127222238
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Entry
127222238 CDS
T08852
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04136
Autophagy - other
prob04140
Autophagy - animal
prob04211
Longevity regulating pathway
prob05010
Alzheimer disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127222238 (Atg13)
04136 Autophagy - other
127222238 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
127222238 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127222238 (Atg13)
05014 Amyotrophic lateral sclerosis
127222238 (Atg13)
05016 Huntington disease
127222238 (Atg13)
05017 Spinocerebellar ataxia
127222238 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
127222238 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127222238 (Atg13)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127222238 (Atg13)
Membrane trafficking [BR:
prob04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127222238 (Atg13)
Atg1 complex
127222238 (Atg13)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127222238 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127222238
NCBI-ProteinID:
XP_051040144
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTGEDAGVT
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSSR
LSYQPAVLGLGSADLAYPVVFTAGLNTTHTHQLMVPGKEGGVPLAPNQPAHGTQADQERL
VTHTPSDGTHYAATPSSSEGTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLT
SLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLHGSLHSDGSSGGSSGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVRE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaagacagaaaggacctggacaagtttattaagtttttt
gcactcaagactgtccaagtaattgtccaggctcgacttggtgaaaagatttgcacccgc
tcatcttcttccccaacgggttcagattggttcaatttagcaattaaagacatcccagaa
gtcacacatgaagcaaagaaggccctttccgggcagctgcctgctgtggggcgctctatg
tgtgtggagatatcactcaagacttctgagggagattccatggagttggagatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacactgtctacaaccga
ctgtcactgctgctgaagtctcttctcgctataacgagggtgacaccagcctatagactc
tccagaaaacaagggcatgaatatgtaatattgtacaggatttattttggtgaagttcaa
ctgaatggtttaggagaaggtttccagacagttcgagttggaacagtgggcacccctgtt
ggcacaatcaccctttcctgtgcttatagaattaatttggcattcatgtctaccaggcaa
tttgagaggacccctcctatcatggggattatcattgatcactttgttgaccgtccatat
cccagctcctctcccatgcacccctgcaattacagaactggtgaggatgctggagtcaca
tacccgtcagtggaagactctcaggaagtgtgtaccacctctttttccacctcccctccc
tcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtgacg
gacactctgagggtccctatggcaggactggccttttcccatcaactctcaagctctcgc
ctttcctatcagcctgctgtcctgggtcttggatcggctgacctggcttatccagtagtg
tttactgctggcttaaacactacacacactcaccagctgatggttcctgggaaggaaggt
ggggtacctcttgctcctaaccagcctgctcatggcacccaggccgatcaggagagactg
gtgactcacacaccttctgatgggacccactatgctgccacaccctctagcagtgagggc
accgagactgtatctaacagcagtgagggacgggcctcaccccatgacgtcttggagact
atctttgtccgaaaagtgggagcatttgtcaacaaacccatcaaccaggtgaccctgacg
agtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatgctgat
cctatggtgaatcccccggactccccagagaccacgtcccccctccacggcagcctgcac
tcagatggctccagcgggggcagcagtggcaatacacatgacgactttgttatgattgac
tttaaacctgctttttctaaagacgacattcttccaatggacttggggaccttttaccgt
gaatttcagaatccccctcagctgagcagcctctccatagacatcggagcccagtctatg
gcagaagacctggactccttaccagagaagctggctgtgcatgagaagaatgtccgagaa
tttgatgcctttgtcgaaaccctgcagtaa
DBGET
integrated database retrieval system
