KEGG   Phodopus roborovskii (desert hamster): 127222256
Entry
127222256         CDS       T08852                                 
Symbol
Psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
  KO
K03065  26S proteasome regulatory subunit T5
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03050  Proteasome
prob05010  Alzheimer disease
prob05012  Parkinson disease
prob05014  Amyotrophic lateral sclerosis
prob05016  Huntington disease
prob05017  Spinocerebellar ataxia
prob05020  Prion disease
prob05022  Pathways of neurodegeneration - multiple diseases
prob05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    127222256 (Psmc3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    127222256 (Psmc3)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127222256 (Psmc3)
   05012 Parkinson disease
    127222256 (Psmc3)
   05014 Amyotrophic lateral sclerosis
    127222256 (Psmc3)
   05016 Huntington disease
    127222256 (Psmc3)
   05017 Spinocerebellar ataxia
    127222256 (Psmc3)
   05020 Prion disease
    127222256 (Psmc3)
   05022 Pathways of neurodegeneration - multiple diseases
    127222256 (Psmc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:prob03051]
    127222256 (Psmc3)
Proteasome [BR:prob03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     127222256 (Psmc3)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_5 nSTAND3 AAA_16 RuvB_N AAA_2 AAA_22 DUF815 AAA_11 Mg_chelatase AAA_33 PhoH DUF5827 IstB_IS21 AAA_24 AAA_7 Sigma54_activat AAA_28 ATPase AAA_14 RNA_helicase Defensin
Other DBs
NCBI-GeneID: 127222256
NCBI-ProteinID: XP_051040208
UniProt: A0AAU9Z8J5
LinkDB
Position
Unknown
AA seq 442 aa
MQEMNLLPTPESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS
EVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQR
KGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV
DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA
RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD
SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP
NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH
EDYMEGILEVQAKKKANLQYYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaatctgctgccgacgcccgagagtccagtgactcggcaggagaagatg
gcgaccgtgtgggatgaagccgagcaagatggcattggggaagaggtgctcaagatgtcc
acagaagagatcatccagcgcacacggctgctggacagtgagatcaagatcatgaagagt
gaagtattgagagtcacccatgaactccaggccatgaaagacaaaatcaaagagaacagt
gagaaaatcaaagtgaacaaaaccttgccataccttgtatccaacgtcattgagttgctg
gacgttgatcccaatgaccaggaggaggatggtgccaatattgacctggactcacaaagg
aagggcaagtgtgctgtgatcaaaacttccacaagacaaacgtacttcctgccagtaatt
gggttggtggatgcagagaagctgaaaccaggagacctggtgggtgtgaacaaagactcc
tatctgatcctggagaccctgcccacagaatatgactctcgggtgaaggccatggaggta
gatgagcggcccacagagcaatacagtgacatcggtggcctggacaagcagatccaggag
ctggtagaggccattgtactgcctatgaaccacaaagagaagtttgagaacttgggtatc
cagcccccaaaaggagtgctgatgtacgggccgcctggtacagggaagactctgcttgcc
cgcgcctgtgccgctcagaccaaggctacgttcttgaagttggcaggccctcagctggtg
cagatgtttattggagatggtgccaagctggtccgtgatgcttttgctctggccaaggag
aaggcgccatctatcatcttcattgatgaattggatgccattggtaccaagcgcttcgac
agtgaaaaagcaggggaccgggaggtgcagaggaccatgctggagcttctgaaccagctg
gatggcttccagcccaacacccaagtaaaggtaatcgcagccactaacagagtggacatt
ctggaccctgcccttctccgctcaggacgcctggaccgcaagattgagttcccgatgccc
aacgaggaggcccgggccagaatcatgcagatccactcacggaagatgaatgtcagtcct
gatgtgaactatgaggagctggcccgttgtactgatgacttcaatggagcgcagtgcaag
gccgtgtgtgtggaggcgggtatgatcgcactgcgcaggggtgctacggagcttactcac
gaggactacatggagggcatcttagaggtacaggccaagaagaaagccaacctgcagtac
tatgcctag

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