Phodopus roborovskii (desert hamster): 127222475
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Entry
127222475 CDS
T08852
Symbol
Ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04622
RIG-I-like receptor signaling pathway
prob05161
Hepatitis B
prob05162
Measles
prob05164
Influenza A
prob05168
Herpes simplex virus 1 infection
prob05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127222475 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
127222475 (Ifih1)
05171 Coronavirus disease - COVID-19
127222475 (Ifih1)
05164 Influenza A
127222475 (Ifih1)
05162 Measles
127222475 (Ifih1)
05168 Herpes simplex virus 1 infection
127222475 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
prob04054
]
127222475 (Ifih1)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127222475 (Ifih1)
Pattern recognition receptors [BR:
prob04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127222475 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
CARD
SWI2_SNF2
DUF3638
Cas3-like_C_2
MoCF_biosynth
Motif
Other DBs
NCBI-GeneID:
127222475
NCBI-ProteinID:
XP_051040533
UniProt:
A0AAU9Z8M9
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MSNVCSTEDSFRYLISIFRSRLKRSFEVEPVLDYLIFLPAETKEQILKKATTCGNTSAAE
LLLSTLEKGEWPPGWTQVFVEGLEHSGSHLAARYVRLADLPSPSSETTHDECLHLLNLLQ
PTLVDKLLITDVLDTCVEKGLLTPEDRNRISAAGNAGNESGVRELLRRIVHKENWFSTFL
DVLRQTGNDALCQELTGAGCPESIAELENSSSQEDGPEALESILSALDESSLETEARDTE
NSSPETSFADCSVTTESDTSLAAGSVSCLDESLGHNSNMGSDSGIMGSDSEERMRPQRAS
PEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKDHLDKRKQASEPGKVMV
LVNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSL
LNLESGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNSLKKQNKPVIHL
PQILGLTASPGVGGAKKQAEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVI
ADDTRENPFKEKLLEIMTSIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKDGNRKDRVCA
EHLRKYNEALQINDTIRMIDAYSHLETFYNDEKEKKFAVLEDSDESEDDASSHDDELKDN
VKKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRKTILEQFTKTEESSRGI
IFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIGAGHSSEVKPMTQNEQKEVISKFRSGK
INLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTE
REIVNDFREKMMYKAINRVQNMKPEEYAREILTLQVQSILEKKMKIKRSIAKHYNNNPSL
ITLLCKNCSMLVCSGEHIHVIEKMHHVNMTPEFKRLYLVRENKALQKKFADYQANGEIIC
KCGQTWGTMMVHKGLDLPCLKIKNFVVDFKNNSSKKQYKKWVELPIRFPDLDCSEYCLCS
DED
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtctgttcaacagaggacagcttccgctatctcatctcaatcttcaggagt
aggttgaaaaggtcctttgaggtggagcctgtgctggactatctgatctttctgcctgca
gaaaccaaagagcagattctgaagaaggccaccacctgtgggaacaccagcgctgcagaa
ctgctgctgagcactttggagaagggggagtggccgccaggctggacacaggtgttcgtg
gagggcctggagcacagtggcagccacctagcagcacgctatgtcagactcgccgatctg
ccctccccctcctctgagaccacccatgatgaatgtctccacctgctgaatctccttcag
cccactctggtggacaagctcctgattaccgatgtcttggatacttgcgtggagaaggga
ctgttgacacctgaggacagaaatcggatctctgctgcaggaaatgctgggaatgagtca
ggtgtaagagagctgttgagaaggattgtgcacaaagaaaactggttttctactttcctg
gatgttcttcgccaaactggaaatgatgccctctgccaagagttaacaggtgccggctgc
ccggaaagcattgcagagttggagaattcgtcatctcaggaagatgggcctgaagctctt
gagtccattctgtctgctctagatgagtcaagtctggagacagaggccagggacacagag
aattcttcaccagagacctcgtttgcagactgctctgtgaccacagaatcagacacaagt
ttggcagcagggagtgtcagctgcttagacgaaagtcttggacataacagcaacatgggc
agtgattcaggcatcatgggaagtgattcagaggaaagaatgaggccacaaagagcatcc
cctgagccagaactgcagctcagaccttaccaaatggaagtggcccaaccagctttggaa
gggaagaatattattatctgccttcccacggggagtgggaagaccagagtggctgtttac
atcaccaaagatcacttagacaagaggaagcaggcatctgaacccgggaaggttatggtc
cttgtcaataaggtgatgttagctgaacaacttttccgcaaagagttcaacccatttttg
aagaaatggtatcgcattattggattaagtggtgatacccagctgaaaatatcgttccca
gaagttgtcaaatcttatgatgttatcatcagcacagctcagatcctggagaattctctc
ttaaatctagaaagtggagaagatgatggtgtgcagctgtcagatttttccctcattatc
attgatgaatgtcatcacaccaataaggaggccgtctacaacaatatcatgaggcggtat
ttgaagcagaagttgaagaacaatagcctcaagaaacaaaacaaaccagtaattcacctg
ccacagattctaggactgacagcttcacctggtgttggaggagccaaaaagcaagcggag
gctgaaaaacatattttaaatatatgtgccaatcttgatgcatttaccattaaaacagtg
aaagagaatcttggtcaacttaaacaccaaataaaggaaccatgcaagaaatttgtgatt
gctgatgacaccagagaaaatccatttaaagagaaacttctggaaattatgacaagcatc
cagacttactgccaaatgagtccaatgtcagattttggaacacagccttacgaacaatgg
gccattcaaatggaaaaaaaagccgctaaagatggaaatcgcaaagaccgtgtctgtgca
gaacatttgaggaagtataatgaagccctacaaatcaacgacacaatccgaatgattgac
gcatacagccacctagaaactttctacaatgatgagaaagagaagaagttcgcagtccta
gaggacagtgatgagagtgaagatgatgctagcagtcacgatgatgaacttaaggacaat
gtaaagaagtctttgaagctggatgaaacagatgaatttctcatgaatttattctttgat
aacaagaaaatgttgaaaaaattagctgaaaacccaaaatatgaaaatgaaaaactcatt
aaattaagaaaaactatactggaacaattcacaaagactgaggaatcatctcgaggaatt
attttcacaaaaactcggcagagcacctatgcactctcccagtggattatggaaaatgaa
aagtttgcagaggttggagtcaaagcacatcatttgattggagcaggacatagcagtgag
gtcaagcccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcagtggaaaa
ataaatctgctgatcgctactacagtggcagaggaaggcctggatatcaaagaatgcaat
atcgttatccgttatggccttgtcactaatgaaatagccatggtccaggcccgtggtcga
gccagagctgatgaaagcacctatgtcctggttaccagcagtggctcgggagttactgaa
cgggagatcgttaatgatttccgagaaaagatgatgtataaagctataaaccgagttcaa
aatatgaagccagaggagtatgcacgtgagattttgacattgcaggtacaaagtatcttg
gaaaagaaaatgaaaatcaaaagaagtattgcaaagcattataataacaatccatcatta
ataacactactctgcaaaaattgtagtatgctagtctgctcaggagaacacatccacgta
attgagaagatgcatcatgtcaacatgaccccggaattcaagagactctaccttgtaaga
gaaaacaaagcactacaaaagaaatttgctgattatcaagcaaatggagagattatctgc
aaatgtggccagacttggggaacaatgatggtacacaaaggtttagatttgccttgtctc
aaaataaagaattttgtagtggatttcaaaaataactcatcaaagaaacaatataagaag
tgggtggaattgcctatcagatttcctgatcttgactgctcagaatattgcttgtgtagt
gatgaagactag
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integrated database retrieval system
