KEGG   Phodopus roborovskii (desert hamster): 127222557
Entry
127222557         CDS       T08852                                 
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04010  MAPK signaling pathway
prob04020  Calcium signaling pathway
prob04721  Synaptic vesicle cycle
prob04723  Retrograde endocannabinoid signaling
prob04725  Cholinergic synapse
prob04726  Serotonergic synapse
prob04727  GABAergic synapse
prob04728  Dopaminergic synapse
prob04930  Type II diabetes mellitus
prob05016  Huntington disease
prob05020  Prion disease
prob05022  Pathways of neurodegeneration - multiple diseases
prob05032  Morphine addiction
prob05033  Nicotine addiction
prob05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127222557 (Cacna1b)
   04020 Calcium signaling pathway
    127222557 (Cacna1b)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    127222557 (Cacna1b)
   04725 Cholinergic synapse
    127222557 (Cacna1b)
   04728 Dopaminergic synapse
    127222557 (Cacna1b)
   04726 Serotonergic synapse
    127222557 (Cacna1b)
   04723 Retrograde endocannabinoid signaling
    127222557 (Cacna1b)
   04721 Synaptic vesicle cycle
    127222557 (Cacna1b)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    127222557 (Cacna1b)
  09164 Neurodegenerative disease
   05016 Huntington disease
    127222557 (Cacna1b)
   05020 Prion disease
    127222557 (Cacna1b)
   05022 Pathways of neurodegeneration - multiple diseases
    127222557 (Cacna1b)
  09165 Substance dependence
   05032 Morphine addiction
    127222557 (Cacna1b)
   05033 Nicotine addiction
    127222557 (Cacna1b)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    127222557 (Cacna1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:prob04040]
    127222557 (Cacna1b)
Ion channels [BR:prob04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   127222557 (Cacna1b)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Ferlin_C
Other DBs
NCBI-GeneID: 127222557
NCBI-ProteinID: XP_051040711
LinkDB
Position
Unknown
AA seq 2348 aa
MVRFGDELSGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFIFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNIL
FAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRAA
TKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVK
AQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVNSPQQN
SAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVE
PGRDGLRGPVGNKSKPEGTEATENADPPRRHHRHRDRDKTSATAPAGGEQDKTDCPKTEN
TETGPREERPRPRRSHSKEASGAEVQVRSERNRRHHRRGSPEEETTEREPRRHRAHRHAQ
ESGKEGTAQVLAPKGERRPRHRGPRTGPREAENSEEPTRRHRARHKGPPTLEPSEREAAE
ESNVAEGDKETRNHQPKEPHCDLETIAVTGVGPLHMLPSTCLQKVEEQPEDADNQRNVTR
MGSQPADPSTTVHVPVTLTGPPGETTVVPSGNVDLEGQAEGKKEAEADDVLRRGPRPIVP
YSSMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSSRNNVLKYM
DYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINT
IKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKG
KFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEG
WPMVLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKV
MSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTV
VLMMKFYDAPYEYELMLKCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFVTVLGS
ITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAM
LFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNR
ACDPYANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDE
FIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMT
VHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDE
MTVGKVYAALMIFDFYKQNKTTRDQIHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGA
RVFLRQKSATSLSNGGAIQTQESGIKESLSWGTQRTQDALYEARAPLERGHSAEIPVGQP
GKLAVDVQMQNMTLRGPDGDPQPGLESQGRAASMPRLAAETQPAPDASPMKRSISTLAPR
PHGTHLCNTVLDRPPPSQASHHHHHRCHRRREKKQRSLEKGPSLSVDTEGAPSSAAGSGL
PQEGSTGCRRERKQERGRSQERRQPSSSSSDKQRFYSCDRFGSREPPQLKPSLSSHPTSP
TAAALEPGPHPQGSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPV
HFAGGQSGLPAFSPGRLSRGLSEHNALLQKEPLSQPLAPGSRTGSDPYLGQRLDSEASAH
TLPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYH
HPDQDHWC
NT seq 7047 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgagtggccgctatgggggcaccggcggcggggagcgg
gctcgaggcggcggggccggcggggcgggtggcccgggccaggggggtctgccgccgggc
cagcgggtcctgtacaagcagtccatcgcgcagcgcgcacggaccatggccctgtacaac
cccatcccagtcaagcagaactgcttcaccgtcaaccgctcgctcttcatcttcagcgag
gacaacgtcgtccgcaaatacgctaagcgcatcaccgagtggccgcccttcgaatacatg
atcctagccaccatcatcgccaactgcattgttctggccctggaacagcacctccctgat
ggggacaagactcccatgtctgagcgcctggatgacacggagccttatttcatcgggatc
ttttgcttcgaggcggggatcaagatcatcgcactgggcttcgttttccacaagggctcc
taccttcgaaatggctggaatgtcatggacttcgtggtggttctcacggggattcttgcc
acagctggaactgactttgatctccggaccctgagggctgtccgtgttctaagacccctg
aagctggtgtctggaattccaagtttgcaggtggtgctcaagtcaatcatgaaggccatg
gttccgctgctgcaaattgggctgttgctcttttttgccatcctcatgtttgccatcatc
ggtctagagttctatatgggcaaattccataaggcctgcttccccaacagcacagatgca
gagccgggtgactttccctgtggcaaggaggccccagctcgcctgtgtgagggtgacact
gaatgccgggaatattggccaggacccaactttggcatcaccaattttgacaacatcctg
tttgccatcttgacagtgttccagtgtatcaccatggagggctggactgacatcctctac
aatacaaatgatgcagctggcaacacctggaactggctgtacttcatccctctcatcatc
attggctccttctttatgctcaacctagtgctgggtgtgctctcaggagagtttgccaag
gagcgggagcgagtagagaaccgtcgtgccttcctgaagctccgtaggcagcagcagatt
gagcgagagctgaatgggtacttggagtggatcttcaaggcggaggaagtcatgttggcg
gaggaggacaagaatgcagaagagaagtcccctttggatgcagtgttgaagagagctgcc
acgaagaagagccgaaatgacctgatccatgcagaggagggggaggaccggtttgtagat
ctctgtgctgttgggtctccatttgctcgtgccagcctcaagagtggaaagacggagagc
tcatcatacttccggaggaaggagaagatgttccggttcttcatcaggcgtatggtgaaa
gcacagagcttctactgggtggtcctgtgcgtggtggccctgaatacactgtgcgtggcc
atggtgcactataatcagccccagcggcttaccactgcactgtattttgcagagtttgtt
ttcctgggtctcttcctcacggagatgtccctgaagatgtatggcctagggcctcgaagc
tactttaggtcttccttcaactgctttgactttggggtgattgtggggagtatctttgaa
gtagtctgggctgccatcaaaccgggaacctcctttggaatcagtgtgctacgggctctc
cgactactgaggattttcaaagtcacaaagtattggaactccctgaggaacctggtggta
tccctcctcaattccatgaagtccatcatcagcctcctcttcctgcttttcctcttcatt
gtggtcttcgctctgttggggatgcagctgtttgggggacagttcaactttcaagatgag
accccgaccaccaatttcgataccttccctgctgccatcctcactgtctttcagatcctg
acaggggaggactggaatgcagtaatgtatcatgggattgagtcacaaggtggagtgagc
aaaggcatgttttcttccttttacttcatcgtcttgacattgtttggaaactacaccctg
ctgaatgttttcctagccattgctgtggacaatcttgccaatgcccaggagttgaccaag
gatgaagaggagatggaagaagcagccaatcagaagcttgctctccagaaggccaaagaa
gtagctgaagtcagccctatgtctgctgccaacatctccatcgctgcttttgtaaagcaa
actcgaggtactgtatctcgcagctcatctgtctccagcgtaaactcaccgcagcagaac
tcggccaaggcgcgctcagtgtgggagcagcgggccagtcagctaaggcttcagaacctg
cgcgccagctgtgaggcactgtacagtgagatggaccctgaggagcgcctgagatatgcc
agcacgcgccatgtgaggccagacatgaagacacacatggaccggcccttagtggtggag
cctggccgggatggcttacggggacctgtagggaacaagtcaaagcccgagggcacggaa
gcaactgaaaatgcagacccaccacgcagacaccaccggcatcgtgatagggacaagacc
tcagccacagcacctgctggtggtgaacaggacaagacagattgtccaaagaccgaaaac
accgagaccgggccccgggaggaacgtccccgcccgcgtcgcagtcatagcaaggaggct
tcaggggctgaagtgcaagttcgcagcgagcgcaacaggcgtcaccaccggcgtggctcc
cctgaggaggagaccaccgaacgggagccccggcgccaccgtgcccaccggcatgcacag
gaatcaggcaaagagggcaccgcacaggtgctcgcacccaagggcgagcgacgcccacga
catcgaggccctcgcacgggtccccgggaggcagagaacagcgaggagcccacacgccgg
caccgtgcgaggcataagggaccaccaacacttgagccctcagagagggaggctgcagag
gagagcaacgtggcagaaggggataaggaaacccgaaaccaccagcccaaggaacctcac
tgtgatctggagaccattgcagttacaggtgtgggtcctctgcacatgctgcccagcacc
tgtctccagaaagtggaagaacaaccagaagatgcagacaaccagcgtaacgtcacccgg
atgggcagtcagcctgcagaccccagcaccactgtgcatgttccagtgacactgacaggc
cccccgggggagaccactgtagttcccagtggtaatgtggacctggaaggccaagcagag
ggcaagaaggaggcagaggctgatgatgtactgagaagaggcccccggcccatcgttcca
tacagctccatgttctgtctcagccccaccaacctgctccgtcgcttctgccattacatt
gtgaccatgcggtactttgagatggtgattcttgtggttattgccctgagcagcattgcc
ttggctgctgaggaccctgtgcgaactgattcatcccggaacaatgttttaaagtacatg
gattacatctttacaggtgtcttcacctttgaaatggtcataaagatgatagacttggga
ctgctgctgcaccctggagcctacttccgggacctgtggaatattctggacttcattgtt
gtcagtggagccctggtggcatttgctttctcaggatccaaagggaaagacatcaatacc
atcaagtccctgagagtcctacgtgtcctgcggcccctgaagaccatcaaacggctgcct
aagctcaaggctgtgtttgactgtgtggtgaactccctgaagaacgtcttgaacatcttg
attgtctacatgctcttcatgttcatatttgccgtcattgccgtgcagctcttcaagggc
aagtttttttactgcactgatgaatccaaggaactggagagggactgcagggggcagtat
ttggattacgagaaggaagaagtagaagctcaaccaaggcagtggaagaaatatgacttc
cactatgacaatgtgctctgggccctgttgacgctgttcacggtgtccacaggagagggg
tggcccatggtgctgaaacactctgtggacgccacctatgaggagcaggggccaagcccc
gggttccggatggagctttccatcttctatgtggtctactttgtggtcttcccttttttc
tttgtcaacatctttgtggccttgatcattatcaccttccaggaacagggggacaaggtg
atgtctgagtgcagcctggaaaagaatgagagggcttgcattgactttgccatcagcgcc
aaacccctgacacgatacatgccgcaaaacaagcagtcattccagtataagacgtggaca
tttgtggtctctccaccctttgagtacttcattatggccatgatagccctcaacacagtg
gtgctgatgatgaagttctatgatgcaccgtatgagtacgagctgatgctgaaatgcctg
aacattgtcttcacatccatgttctctatggaatgcatattgaagatcatcgcctttggg
gtcctgaactacttcagagatgcctggaacgtctttgactttgtcactgtgttgggaagt
attactgatattttagtaacagagattgcgaacaacttcatcaacttgagcttcctccgc
ctcttccgggcagcacggctgatcaagctgcttcggcagggatacaccatccgcatcctg
ttgtggactttcgtccagtcctttaaggcgctgccctacgtgtgcctcctcattgccatg
ctgttcttcatctacgccatcatcggcatgcaggtttttggaaacattgcccttgatgat
gacaccagtatcaaccgacacaacaacttccggacatttctacaagccttaatgctgttg
ttcaggagtgccactggggaggcctggcatgagatcatgctgtcttgtctgggcaaccgg
gcctgcgacccatatgccaacgccagtgaatgtgggagcgactttgcctacttttatttt
gtctccttcatcttcctttgttcctttctgatgttgaacctctttgttgctgtgatcatg
gacaattttgagtacctcacgcgggactcttccatcctagggcctcaccacctagacgaa
ttcattcgagtctgggctgagtacgacccagctgcgtgtgggcgcatcagttacaatgac
atgtttgagatgctgaaacacatgtccccacctctggggttggggaagaaatgcccggct
cgagttgcatacaagcgcctggttcgcatgaacatgcccatatccaatgaggacatgacg
gtgcactttacctccacactgatggccctcatccggacagcactggagatcaagcttgcc
ccagcagggacaaagcagcaccagtgtgatgctgagctgagaaaggagatatcatctgtg
tgggctaatctgccccagaagactctggacttacttgtaccaccccacaaacccgatgag
atgacagtggggaaagtttatgcagctctgatgatatttgacttctacaaacagaacaaa
accacccgagatcagattcaccaagctcccggaggcctgtcccagatgggtcctgtgtcc
ctgttccaccctctgaaggccaccctggagcagacccaacccgctgtgcttcgaggagct
cgggttttccttcgacagaagagtgccacttccctaagcaatggtggtgccatacaaacc
caggaaagcggcatcaaggagtcactgtcctggggcacacagaggacccaggatgcactt
tatgaggccagagcaccactagagcgtggccattctgcagagatccctgtggggcaacca
ggaaaactggctgtggatgtccagatgcagaacatgacattgagaggacctgatggggat
ccccagcctgggctggagagccaaggccgagctgcctctatgccacgcctggcggcagaa
acacagcctgcccctgatgccagccccatgaagcgctccatctccaccctggctccacgc
ccccacgggactcacctttgcaacacagtcctggaccggcctccccctagccaggcatca
catcaccaccatcaccgctgccaccggcgcagggaaaagaagcagaggtccctggaaaag
gggcccagcctgtctgttgacacagaaggtgcaccaagcagtgctgcaggatctggcttg
ccacaagaaggatccacaggctgccgacgggagcgcaagcaggagcgaggaaggtcccag
gagcggaggcagccttcgtcgtcctcttcagacaagcagcgcttctattcgtgtgaccgc
tttgggagtcgggagcccccacaactcaagccctccctcagtagccaccccacatctcca
acggcggcggcactagaaccaggaccccacccacagggcagtggttctgttaatgggagc
cctttgatgtcaacatctggtgctagcaccccaggccgtggtggacggaggcagctcccc
cagactcccctgaccccacgccccagcatcacctacaagaccgccaattcctcacctgtc
cactttgctgggggtcagagtggcctcccagccttctcccctggccgtctcagccgcggc
ctttctgaacacaatgccctgctccagaaagagcccctgagccaacctctagcacctggc
tctcgcactggctctgacccttacctagggcagcgtctggacagtgaggcctctgcccac
accctgcctgaggatacacttacctttgaagaggcagtggctaccaactctggtcgctct
tccaggacttcctacgtgtcctccctcacctcccaatcccaccctctccggcgtgtgccc
aatggctaccactgcactttgggactcagcaccggcgtccgggcgcggcacagctaccac
cacccagaccaggaccactggtgctag

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