Phodopus roborovskii (desert hamster): 127222637
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Entry
127222637 CDS
T08852
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
prob05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127222637 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
127222637 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127222637 (Taf4)
03036 Chromosome and associated proteins [BR:
prob03036
]
127222637 (Taf4)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127222637 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
127222637 (Taf4)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127222637 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
127222637
NCBI-ProteinID:
XP_051040872
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRHPGSSSPRRLLVPAGPA
PAPAKLRPPPEASAGPCPAAAAAAAAAAGPDPAAAAAAPPAGPGASKPGPPGPPGPGAAQ
TLNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAPAAPSPPAAPAPAAPPPP
APPAPAAPARPPGHPAAPAPPVSPAAAAAAAAQNGAAPAPAAASGGAAGLGQPGAGAQGA
KAEPPKPVPGTGPAAAAAAAAGVAGGGAAGGVLLGPAMPGALPGPAPGTPAGLAKGAAAA
TPSLPRTPAATAGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMI
PQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQVTPTTIIKQVS
QAQTTVQPTTTLQRSPGVQPQLVLGGSAQTASLGTATAVQTGTPQRTVPGASTTSTAATE
TMENVKKCKSFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSS
PQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSSSVQRTAGKP
ASSVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVTLTQTPMVALR
QPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFR
DDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKH
GITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQ
LDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTAL
AAIGPRKKRKVDCAGPGSGAEGSGPGAAVPGSSGVGTPRQFTRQRITRVNLRDLIFCLEN
ERETSHSLLLYKAFLK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcacccgggctccagctcaccgcgccgcttgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgcccggccgcc
gccgccgccgccgccgccgccgcggggccggatcccgccgccgccgccgccgccccgccc
gccggccccggcgcctccaagcccggcccgcctggcccgcccggccccggcgccgcgcaa
actttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccg
gtcaacaacgggcccgcgccgccgcccgccgccggctctgtcatccaggcggcccccgcg
cccgcgcccgccgcgccctcgcctcccgccgcgcccgcgcccgccgcgcccccgccgccc
gcgcccccagcgcccgccgcgccagcccggccgcccgggcaccccgccgcgcccgcgccc
cccgtgtcacccgccgccgccgccgccgccgccgcgcagaacggggccgctcctgccccc
gccgcggcctccgggggcgccgcggggctgggccagccgggcgcgggcgcgcagggggcc
aaggccgagccgcccaagcccgtgcccgggaccgggccggcggcggcggcggcggcggcg
gcgggggtcgcgggcgggggcgcggcgggaggcgtgctgctcgggcccgccatgccgggc
gcgctgccggggcctgcgcccgggacccccgcggggctggcgaagggcgcggccgcggcg
acccccagcctgcctcggacgccggctgccaccgccggcgctatccgggccacgctgacg
cccaccgtactggccccgcgcctgccgcagccgccgcagaacccgaccaacatccagaac
ttccagctgcccccaggaatggtcctcgtgcggagtgagaatgggcagttgttaatgatc
cctcagcaggccctggcccagatgcaggcccatgcccaggcccagcctcagagcaccatg
gcaccccgtcctgcaacccccacaggtgctccacctgtccagatctccaccgtgcaggct
ccaggaacacctattattgcacggcaggtgaccccaactactataattaagcaagtgtct
caggcccagacgacggtacagcccactacaaccctacagcggtctcctggggtacagcct
cagctggttctgggtggttctgcacagacagcctcacttggaacagccacagctgttcag
acagggacacctcaacgaacagtccccggggccagcaccacctccacagctgccacggaa
actatggaaaatgtgaagaaatgtaaaagttttctatctactttaataaaactggcttcc
tctggtaaacagtctacagagacagcggctaatgtgaaagaattagtacagaacttgctg
gatgggaaaatcgaagcagaggatttcactagcaggttatatcgagaattgaactcttca
cctcaaccttaccttgtgcctttcctgaagaggagcttacctgccttgagacagctgacc
ccagactccgcggccttcatccagcagagccagcagcagcagccacccgcctcacaagcc
accactgcactcacagctgtggtgctgagcagctcggtgcagcgcacagctgggaaaccg
gcttcctcggtgaccagcgccctccagcccccggtcatcagcctcacgcagcccacacag
gttggcgttggcaagcaggcaccgcccacaccactggtgatccagcagcccccgaagcct
ggagccttgatccggcccccgcaggtgaccttgacgcagacacccatggtcgcattgcgg
cagcctcacaaccggatcatgctcaccacaccacagcagatacaactgaaccagctgcag
ccagtccctgtggtgaaacccaccgtgttacctggaaccaaagccctttcaaccgtatct
gcacaagcagctgctgcacagaaaaacaagctcaaggagccagggggaggctcctttcgg
gatgacgatgacatcaatgatgtcgcttcaatggctggagtgaacctgtctgaagaaagt
gcaagaatattggccacaaactctgagttggtggggacacttactcgatcctgtaaagac
gacaccttcctcctccccgcacctttgcagaggaggatactggaaataggtaaaaagcac
ggcatcacggaattgcatccggatgtagtgagttacgtgtctcatgccacacagcaaagg
ctgcagaatcttgtagaaaaaatatctgaaacagctcagcagaaaaacttctcttacaag
gatgacgacagatacgagcaagcgagtgatgtccgggctcagctcaaattctttgaacag
cttgatcagattgaaaagcagaggaaagatgagcaggagagggagatcttgatgcgggca
gcaaagtctcgatccagacaagaagacccagagcaattaaggttgaagcagaaagcaaaa
gagatgcagcagcaggagctggcacagatgcggcagcgagatgccaacctcacagcgctg
gcggcgattgggccccggaaaaagaggaaagtggactgtgccgggccggggtcgggagca
gagggctcaggcccaggcgcagcggtcccaggaagctccggcgtgggaacccccagacag
ttcacacggcaaagaatcacgcgggtcaacctcagggacctcatattttgtttagaaaat
gagcgtgagacaagccattcactgttgctctacaaagcattccttaagtga
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integrated database retrieval system
