Phodopus roborovskii (desert hamster): 127222654
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Entry
127222654 CDS
T08852
Symbol
Adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
127222654 (Adamts13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127222654 (Adamts13)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
127222654 (Adamts13)
Peptidases and inhibitors [BR:
prob01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127222654 (Adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADAMTS_CR_3
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
TSP1_CCN
TSP1_spondin
Reprolysin_5
Adt-1
Reprolysin_4
Reprolysin_2
Peptidase_M10
CUB
Motif
Other DBs
NCBI-GeneID:
127222654
NCBI-ProteinID:
XP_051040887
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MSELCLRVTCQSFHAVSIRGVLTGAFFILSCWGLSDFQKSFLQALEPKKITSYFGHHAAA
LTGHPSSHLQRLRWRRTLRDILHLELLVAVGPDIYQVHQEDTERYVLTNLNIGSKLLRDS
SLGAQFQVHLVKLIILSDSEITPNITTNITSSLMSVCEWSHTINPHDDSDPSHADLILYI
TRFDLELPDGNKQVRGVTQLGGACSPSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGTP
GSGSTCEASGHVMASDGAGPTGGALEWSTCSQRQLQHLLSIGQMHCFWDPPGMQSALSWH
QLMAQPGLYYSADDQCRVAFGSGAVACTFSREGLDVCQALSCHTDPLDQSSCSRLLIPLL
DGTECGVEKWCSKARCQSLAELSPVAAVHGHWSSWSPHSPCSRSCGGGVVTRRRWCNNPR
PAFGGRTCVGEDLQAKMCNTQACEKTQLEFMTEQCAQTDSQPLHLPQGGASFYHWDAAVQ
YSQGDTLCRHMCWAVGENFIVSRGDSFLDGTRCVPTGPREDGTLSLCVLGSCRTFGCDGR
MDSQKVWDACQVCGGDNSTCSSQNGSFTGGRAREYVTFLTVTPNMTSVHIVNRRPLFTHL
AVRIQGHYIVAGKTSISPSIVYPSLLEDYRVEYRVILTEDRLPHLEEIHIRGPVQEDMEI
QVYRRYRAEYGDLTHPDITFTYFQLKQQAAWVWMAIRGPCSVSCGAGLRWVTYSCQDQDQ
SKGVNSALCQGSPQPPAWQEPCIPAPCPPYWTTGDFGPCSVSCGGGLRERLVHCVEVQDG
FLRTLPPAQCKAVAQQPAAEVENCNSQPCPTRPQVSDPGPCMTTCEDLASRNVTRVPKVG
DPEDPATTGPCLTDEMPPTLEPCFRTTCSPGWDQLDTMSLGEEAPSPVGSDKSGAQAAHV
WTPVTGLCSTSCGRGLMELHFLCMDSVLKIPVQEELCDLASKPSSRWEICRAGPCPARWE
TQILAPCPVTCGGGTVPLAVHCMQXGHGXPPVFLPHSKCWPMPRPFPFKDCNPEPCPARW
KILSLGPCSASCGLGTATRMVACMQFGQGNDSEVDETFCKALVRPRASVPCLIADCAYRW
HISSWAECSVSCGDGIQRRHDTCLGPQAQVPVPASFCQHLPKPVTVRGCWAGPCAGQETP
SSLAQQEATLPSQTQAAVTVASLVWSQPQVQAHTLFPASQSRGIQEILEESGACGRQYLE
PSGTIDMRGQEQEDCVVAIGRPLGEVLTLQILQSTLKCSAGELLLLWGRFTWRKTCWKMS
GMTFSTKTNTLVVRQHRVLPGGGVLLQYWSQPAPGTFYRECDRQLFGPRGEIVSPPWSPD
GRNARSCRVFINVAPQARIAIRALASDVGTASKGTSANYVSIRDIHSLRTTTFWGQQTLY
WESEGSEAELEFSPGFLESHASLQGQYWTIPLRTP
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctttgcctacgggtgacatgtcaatcttttcatgctgtcagtatcagagga
gtcctcactggtgccttcttcattctgagctgctgggggctctctgatttccagaagagt
tttcttcaagctctggaacccaagaagataacctcttactttggccaccatgctgcggca
ctcacaggccatccttcctctcacctccagagactgagatggagaaggactttgagggac
attctgcacctggaactactggtagctgtgggtcctgacatctaccaggttcaccaggag
gacacagaacgctatgtgctcaccaacctcaatatcgggtcaaaattgctgagggactca
tccctgggggctcagttccaggtgcacctggtgaaactgatcattctctctgactcggag
attactccaaatatcacgaccaatatcacctcatcactgatgagtgtctgtgagtggagc
cacacaatcaacccccatgatgacagcgatccaagtcatgctgacctgattctttatata
accaggtttgatctggagttgcctgatggtaacaagcaggttcggggggttacccagctg
ggaggtgcctgctccccttcctggagctgcctcatcactgaggacactggattcgaccta
ggggtcaccattgctcatgagattggacacagctttggcctggaccatgatggtactcca
ggcagtggcagcacctgtgaggccagtggccatgtgatggcgtctgatggcgcgggacct
acaggaggggccctggagtggtccacctgcagtcaaaggcagttgcagcacctgctcagc
atagggcaaatgcactgcttctgggacccacccgggatgcagtcagcactttcatggcac
cagctgatggcacagcctggcctctactacagtgcagacgatcagtgccgtgtggctttc
ggctctggggctgtcgcctgcaccttctccagggagggtctggatgtatgccaggctctg
tcctgccacacagaccccctggaccaaagcagctgcagccgcctcctcattcctctcctg
gatgggacagaatgtggtgtggaaaagtggtgctccaaggctcgctgccaatccctagcc
gagctaagccctgtggcagcagtacatggacactggtccagctggagcccccatagtcct
tgctcccgatcctgtggaggaggtgtggtcactaggagacggtggtgcaacaatcccagg
cctgcctttgggggacgtacatgtgtgggtgaggacctccaggctaagatgtgcaacaca
caggcttgcgagaagactcagctggagttcatgacggagcagtgtgcccagactgacagc
cagccactgcaccttccccaaggtggtgcctccttctaccactgggatgccgctgtgcag
tatagtcaaggggacactctgtgcagacacatgtgctgggctgttggagagaacttcatt
gtgagccgtggagacagtttcctagatgggacccgctgtgtgccaactggtcctcgggaa
gatgggactctgagcctgtgtgtgctgggcagctgcaggacatttggctgtgatggtagg
atggactcccagaaggtttgggatgcgtgccaggtgtgcggaggagacaacagcacatgc
agttcacagaatggctctttcacgggtgggagagccagagaatatgtcacattcctgaca
gttactcccaacatgaccagcgtgcacatcgtgaaccgcaggcctctcttcacacacttg
gcggtgaggatccagggacactacattgtggcagggaagaccagcatctcacctagcatc
gtatacccttcccttctggaggactatcgtgtggagtacagagtgatcctcactgaggac
cggctgccccacttagaggagattcacatccgaggacctgtccaggaagacatggagatc
caggtatacagacgatacagagcagaatatggagatcttacacacccagacatcaccttt
acctattttcaactaaagcagcaggctgcttgggtatggatggctattcgtggcccctgc
tcagtgagctgtggggcagggctgcgctgggtgacctacagctgccaggatcaagatcaa
agcaagggggtgaatagtgctctgtgccaagggagcccacagccacctgcatggcaagaa
ccttgtattcctgccccctgccctccatactggacaactggagacttcggtccatgtagt
gtgtcttgtggtgggggtcttcgggagcgactagtgcactgtgtggaggtccaagatggt
ttcttaaggacactgccaccagcccagtgcaaagcagtagcccagcagccagcagcagag
gtggaaaattgcaactcccagccctgtcccaccagaccacaggtgtcagaccctggccct
tgcatgaccacctgtgaagatctggcctcaagaaatgtgacgcgtgtgcccaaggtgggt
gacccggaggacccagcaactacaggtccctgcctcacagatgagatgccacctacactg
gagccctgtttcaggaccacatgctctccaggctgggatcagctggacaccatgtctctg
ggagaggaggctccaagccctgtgggcagtgacaagtcaggggctcaggctgcccacgtg
tggactcctgtgacggggctgtgctccacctcttgtgggcgaggtctgatggagctacat
ttcctgtgcatggattctgtcctcaagatccctgtccaggaagagctatgtgacttggcc
agcaagccctctagccgatgggagatctgccgggctggcccatgccctgctcggtgggag
actcaaatcttggcaccatgcccagtgacctgtggagggggaactgtgccattggctgtt
cattgtatgcaanatggccatggctgacctcctgtgtttctaccccactccaagtgctgg
cccatgcctaggccattccccttcaaggactgcaaccctgagccctgtcctgcaagatgg
aaaatattgtcccttggcccatgctcagccagctgtggccttggcactgccacacgaatg
gtggcctgcatgcagtttggccaaggcaatgacagtgaagtggacgaaactttctgtaag
gctctggtgcggccccgggccagtgtcccctgcctcatcgctgactgtgcctaccggtgg
cacatcagctcatgggcggagtgttctgtttcctgtggggatggcatccagcgccggcat
gacacctgccttggaccccaggcccaagtgcctgtgccagccagcttctgccagcaccta
cccaagccagtgacagtgaggggctgctgggctggaccctgtgcagggcaggagaccccc
agctcactggctcagcaggaagctactcttcccagccagactcaggctgctgttactgtt
gcttctctggtgtggtcccagccccaagtccaagcccacaccctcttcccagcctcccag
tctcggggaattcaggaaatcctggaggagtctggtgcctgcggaaggcagtacctggag
ccctcaggaacaattgacatgcgaggccaagagcaggaagactgtgtggtggccattggg
cggcctctaggtgaagtgctgaccctccaaatcctccagagcaccctcaagtgtagtgca
ggagagctgttgctgctctggggtagattcacatggaggaagacatgttggaagatgtct
ggcatgactttcagcaccaaaaccaacacactggtggtgaggcagcatcgtgtgctgcca
gggggcggagtgctgctacagtattggagccagcctgccccagggaccttctacagagaa
tgtgacaggcagctctttggacctcggggtgaaattgtgagtcccccatggagcccagat
gggaggaatgcaaggagctgcagggtcttcatcaatgtggccccacaggcccgcattgcc
atccgtgccctggccagtgatgtgggcactgcctctaaggggaccagtgccaactatgtc
tcgatcagagatatccacagtttgaggaccacaacattttgggggcaacagacgctctac
tgggagtcggaaggcagtgaggctgaactggagtttagccctggtttcctggagtcgcat
gcaagcctccagggtcagtactggaccatcccactgaggacaccataa
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integrated database retrieval system
