Phodopus roborovskii (desert hamster): 127222690
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Entry
127222690 CDS
T08852
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04015
Rap1 signaling pathway
prob04510
Focal adhesion
prob04722
Neurotrophin signaling pathway
prob04910
Insulin signaling pathway
prob05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
127222690 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127222690 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127222690 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
127222690 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
127222690 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
127222690
NCBI-ProteinID:
XP_051040973
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MGNAVEKQKPLRQSHLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKI
TEKPVSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PASKPDGHPELPLTDREMEILSKTTTGVSPPTELLPDSTSEEVAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYSQRRLSGGSRSCGG
ESPRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQA
ACSLSPLPESLGEAGPPFLGPLQLPLGSCPQQEGQQTDTPPALPEKKRRSAASQTTDSSG
CRVSYERHPSQYDNISEDDLQNPVPVQPVPYTPFAAILPFQQGTSSAPVEFVGDFSVPES
AGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLMEVYGFS
DSFCGSDSTQELAPPPALPPKQRQLQASYAASSFSVSYCVQQTKVAFTPEDGSAAQGLSV
SVSNSFLNRHGSLPVPSYKSVFRSYSQDFMPHHQASVQPFLPPTSSSSPHFPPVHASQSS
DLAVPTVSSPPPSTVDGPLSSSQDSSFHGNPVRLPSETSFTDSIENAISEGDYVSLYSSG
QTSEELAPSRGEPSSGKDGHPRDPSVNSVSGKDSRENGERSPKSLDALESAQSEEEVDEL
SLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFIS
PEDLIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFR
LVCSGELSLARVLRKNILDKVDQKKLLRCAHSDQPLAARGVAARPGTLHDFHSHEIAEQL
TLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRER
LLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQRQTSEGLAEYCTLIDSSSSFR
AYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQA
HYEIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctgttgaaaaacagaagcccctgagacaaagccatctgtgcccttggaaa
caagactctcagcgctctcatctctcctccttcaccatgaagctgatggacaaattccac
tctcccaaaatcaagagaacaccatccaagaagggaaagccagccgaggtgtcgaagatt
accgagaaacctgtgagcaaagaggcaagagacagatttctaccagagggctaccctatc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggccattgataagaaggttctggagatg
ctgccagggtcagccagcaaggtgctggaggccatcttacccctggtacagactgaccct
cggatccagcacagttcagccctctcctcctgctatagccgagtataccagagtctcgcc
aacctcattcgatggtctgaccaggtgatgctagaaggtgtgaactcagaagataaggag
atggtgacaactgtgaaaggggtcatcaaagctgtgctggatggagtgaaggagctagta
aggctaaccattgagaagcaggggcggccatcaccaacaagcccagtgaagcccagttcc
ccagccagcaagcctgatggccaccctgagctccctctgacagaccgggaaatggagatt
ctgagcaagacaacaacaggggtgtcaccacccactgaactgctcccagactccactagt
gaagaggtcgcaccccctaagccccccttacccggcattcgggtggttgataacagtcca
ccagcgttaccacccaagaaaaggcagtctgctccatcccctacccgagtggctgtggta
gcccctatgagtcgagctaccagcggctccagtttgcctgttggaatcaataggcaggac
tttgatgttgactgttactcccagaggcgcctgtcgggaggcagccgctcctgtggtggt
gagtctcctcgcttgtccccctgcagcagcacaggcaaactcagccggtcagatgagcag
ctgtcttccctagacagggatagtgggcagtgctcacggaacacaagctgtgaaacacta
gaccactatgaccctgactatgaattcctccagcaagacctctccaacgcagaccaggca
gcctgcagcctcagcccactaccggagtccctgggggaggctgggcctccgtttcttggc
cctttgcagctgcctctgggcagctgtccccagcaggaagggcagcagacagacactcca
cctgcccttcctgagaagaagcgcaggagtgcagcctcccagactacggacagctctggc
tgcagggtgtcctatgaacgacacccatcacagtatgacaacatctcagaagatgacctg
cagaacccagtcccagtccagcctgtgccctacacgccctttgctgctatcctgcccttt
caacagggaacttcctcagcccctgttgagtttgtgggtgatttcagtgttccagagtca
gcgggtgaccccgagaagccacctcctctaccagaaaagaaaaacaaacacatgctggcc
tacatgcagctgctcgaggactactcagagccacagccctccatgttctaccaaacaccg
cagagtgagcacatataccagcagaagaacaagatgctcatggaggtctatggcttcagc
gactccttctgtggcagcgactctacgcaggagctggcccccccacccgccctgcctccc
aagcagcggcagctgcaggcctcctatgctgcttcttccttctctgtctcctactgtgtc
cagcaaactaaagtggccttcacccccgaggacggcagtgccgctcagggcctcagtgta
tccgtgtctaactcctttctcaaccggcacggcagcttgcctgtgccctcgtacaaatct
gtgtttaggtcttactcccaggacttcatgcctcaccaccaagcctccgtccaacctttc
cttccgcctacctcctcttcctctccacatttcccacctgtccacgcgtcccagagctcg
gacttagcggtgcccaccgtaagcagtccgcctcccagcaccgtggacgggcctctctcg
tcttctcaggacagcagctttcatgggaaccctgtccgccttccttccgaaacctctttc
actgactcgattgaaaatgccatcagtgagggtgactatgtcagtctgtattcctctggc
cagaccagcgaggagctggccccctctcggggagaaccatcatcagggaaggacggacat
cccagagatccctcagtcaatagtgtatctgggaaggacagcagagaaaatggggagagg
tccccaaagtcactggatgctctggagtcagcccagtcagaagaggaagtggatgaactg
tccctcattgaccacaatgaaattatggccaggctgacactcaagcaagagggtgatgat
gggccagatgttcgtggaggttcaggagacatcttactggtccatgctactgagacagac
agaaaagatctggtgctgtactgtgaggccttcctgaccacctacaggaccttcatcagc
cccgaggatctcatcaagaaactgcaataccgatatgagaagttctctcctttcgctgac
accttcaagaagcgagtcagcaagaacactttctttgtgttggtgcgagtggtggatgag
ctttgcctggtggagctgacggaggagatcctgaagctgctgatggagctagtcttccgc
cttgtgtgcagtggagagctcagcctggcccgcgtgctccggaagaatattctggataag
gtggaccagaagaagctgctcaggtgtgcccattccgaccagcctctggcagccaggggt
gtcgcagccaggccagggacattgcatgatttccacagccatgagatagcagagcagctg
acactgctggacgcagagcttttctataagatagagattcccgaagttttgctttgggcc
aaagagcagaatgaggagaagagccccaacctgacccagttcacagagcacttcaacaac
atgtcctactgggtacggtccatcatcatgctgcaggagaaagcccaggaccgggaaagg
ctgcttctgaagttcatcaagatcatgaagcacctgcgcaagctgaacaacttcaactcc
tacctggccatcctctcagctctggactcagcacccatccgaagactggagtggcagagg
cagacctcagagggcctggccgagtactgcacattgattgacagctcatcctctttccga
gcctaccgggctgccctctcagaggtggagcccccatgtatcccatacctaggtctgatc
ctgcaggacctgaccttcgttcacctggggaacccagactatatcgatgggaaagtgaac
ttctccaagcggtggcagcagttcaacatcttggacagcatgcggtgctttcagcaggcg
cactacgaaatccggagaaatgacgacatcataaacttcttcaatgacttcagcgaccac
ctggccgaggaggccctatgggaactctctctgaagatcaaacccaggaacataacaagg
cggaaaacagaccgggaagagaagacctag
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