Phodopus roborovskii (desert hamster): 127222694
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Entry
127222694 CDS
T08852
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03082
ATP-dependent chromatin remodeling
prob05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127222694 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127222694 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127222694 (Ss18l1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127222694 (Ss18l1)
GBAF(ncBAF) complex
127222694 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
127222694
NCBI-ProteinID:
XP_051040994
UniProt:
A0AAU9YQ60
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSSSSQGLHPQGSLSDAISTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATTHYNSAQGGSQHYQGQAPIAMMGQGGQGSSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGAAEPMSQQYYPDGHGDYSYQQSSYTEQSYDRS
FEDSTQHYYDGGNSQYSQQQTGYQQGSAQQQTYPQQQYPNQQSYPGQQPGYGPAQGAPSQ
YSGYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtcggcgcggccgagaggcaaaggggaggtcacccagcagacc
atccagaagatgctggatgagaaccaccacctgatccagtgcatcctggattaccagagc
aagggcaagacggccgagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggctacgatagcagactccaaccagaatatgcagtcactgcttcctgcgccgccaacc
cagaacatgaacctgggccccggagcactgagtcagagcagttccagccagggcctgcat
ccccagggcagcctcagtgatgccatcagcacgggtctgccccctgcctccctcatgcag
ggccagattggaaacggtccaaaccacgtgtccatgcagcagacggcacagagcacactg
cccacaacctccatgagcatgtcgggcagtggccacggtacgggtcctggctacagccac
tcgggacccacctcgcagagcgtccccatgcaaggccagggtgccatcagcaactacgta
tctcggaccaacatcaacatgcagtccaacccagtctccatgatgcaccagcaggcagcc
acaacccactacaactcagcccagggcgggagccagcattaccagggccaggcgcccatt
gccatgatgggccagggtggccaagggagcagcatgatgggccagcggcccatggcgccc
taccgaccctcccagcaaggctcttcccagcagtacctaggccaggaggagtactacagt
gagcagtacagccacagccagggcgctgcagagcccatgagtcaacagtactacccagat
ggccacggcgactacagctaccagcagtcgtcttatacagagcagagctacgaccgctca
tttgaggattccacacagcactactatgacgggggaaactcccagtacagtcagcagcag
acggggtaccagcagggctcagcgcagcagcagacctacccgcagcagcagtaccccaac
caacagagctacccggggcagcagccaggctacggccctgcccagggagccccctcacag
tactcaggctaccagcaaggacaaggccaacagtatggaagctacagagcatcacagacg
ggaccttctgcccagcagcagcggccttacggctatgagcagggccagtatggaaattac
cagcaataa
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