Phodopus roborovskii (desert hamster): 127222805
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Entry
127222805 CDS
T08852
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127222805 (Ctcfl)
03036 Chromosome and associated proteins [BR:
prob03036
]
127222805 (Ctcfl)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127222805 (Ctcfl)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127222805 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
C2CH-3rd_BIRD-IDD
Zn_ribbon_8
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
127222805
NCBI-ProteinID:
XP_051041223
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MAAAEVPVPSEHFTQIKEQKWKPGEEEEKEEGGVQRMEAQEGAVEAEAAPCQLLDAVGLQ
KDQPELPLWVPAESDRRILTLQTVHLAPQEVHLQGLGWLSVPHSEEFPVMLPQEETFLPL
PSVLWLEQEPQPGLQHCVTISIPEELYQPEELELMHFHLLQDSVPAAEVGQELTPNLGES
AAPRKFEDQLSPGGEPDTEGEERLLFVEMTPNSEGKDAILLTISHLRLEEQQDQALPQQS
SAPNAETTTPPRGAKGKTRTFQCDACPFTSSKFSTFTRHVKIHSDERPHLCHLCLKAFRT
VTLLRNHVNTHTGTRPHKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSICKYASVEASK
LKRHIRSHTGERPFQCCQCTYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIH
VAQKHGENVPKHECPHCATTIARKSDLRVHLRNLHSHSPEEIKCRYCPAGFHERYALIQH
QRTHKNEKKFKCKQCDYACKQERCLKAHLRTHTGEKPFLCLDCSKHFRQKQLLTVHLRKY
HDPSFVPDVHLCLKCGKGFSRWSNLQRHRKKCDSEQEKVATSKNGRPVQTRQATEEGPGW
DNDVATQAQDTTKEAQCPGELALGHHGGGGSESAAGSENLDEGLTCEMIFNMMDK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgaggtccctgtcccttctgagcatttcacccaaatcaaagagcagaaa
tggaagcctggagaggaagaggaaaaggaggagggtggggtacaaagaatggaagcccag
gagggcgctgtggaggcggaggccgcgccctgccagcttctggatgcagtgggactccag
aaagaccagcctgagctgcctctgtgggtcccagcagagagcgatagacggatcctgacc
ctgcagaccgtgcacttggccccccaggaagtgcacctgcaggggctggggtggctgagc
gtgccacactccgaggagttcccagtgatgctaccacaggaggaaaccttcctgccattg
ccatccgtgctgtggcttgaacaagagccccagcccggcctccagcactgtgtgaccatc
agcatcccggaagagctgtaccagcctgaggagctggagctgatgcattttcacctgctg
caggacagtgtgcccgccgccgaggtgggccaagagttaacacccaacctgggtgaaagc
gcagccccgaggaagtttgaagaccaactgtcaccagggggagagccggatacggaagga
gaagagaggctcctttttgtggagatgactccaaacagtgaaggaaaagatgcgattctt
ctgaccatttcccatctgagactggaagagcagcaagaccaggcgttgcctcagcagagc
agtgcacccaacgccgagaccacaacacctcccaggggggccaagggaaaaaccagaacc
ttccagtgcgatgcctgtccgttcacttcttccaaattctcaactttcacccgtcacgtg
aaaattcacagcgacgagagacctcacctgtgccacctgtgtctgaaggctttccgcaca
gtcacgctccttcggaaccacgtcaacacgcacacaggaaccaggccccacaagtgcggg
gactgtgacatggcatttgtcaccagcggagagctggtccggcacaggcgttacaaacac
acgcatgagaagcccttcaagtgttccatctgcaagtatgccagcgtggaggcaagcaag
ctcaagcgccacatccgctcacacacgggtgagcgtcccttccagtgctgccaatgcact
tacgccagcaaggacacctacaagctgaagcgccacatgcggacccactcaggtgagaag
ccttatgaatgccccacctgccatgcccggttcacccagagtggcaccatgaaaatccac
gtggcacagaaacatggcgagaatgtgcccaagcacgagtgtccccactgcgctaccacc
attgcaaggaagagcgacctgcgtgtccatctgcgcaacctgcacagccatagccccgag
gagatcaagtgccgatactgtcctgccggcttccatgagcgctatgccctcatccagcac
cagagaacccataagaatgagaagaagttcaagtgcaaacagtgtgattatgcgtgcaag
caggagcgctgcttgaaggcgcacctgcgcacgcacacaggggagaagccattcctctgc
ctggactgcagcaaacacttccggcagaagcagctgcttactgtgcacctgaggaagtac
catgacccgagctttgtcccggacgtgcacctatgcctcaagtgtggcaaaggcttttct
cgctggagtaacctgcagagacataggaagaagtgtgactcagagcaggagaaggtggcc
acctccaaaaatggaagaccggtacagacaaggcaggccacggaggaaggacccggatgg
gacaatgatgttgctacccaggcacaggataccacgaaggaggcacagtgccctggggag
ctggctctgggccaccacggtggtggcggcagcgaaagtgcagccgggagcgagaacctg
gatgaaggcctgacctgcgagatgatctttaacatgatggataagtga
DBGET
integrated database retrieval system
