Phodopus roborovskii (desert hamster): 127223034
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Entry
127223034 CDS
T08852
Symbol
Sec24b
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127223034 (Sec24b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127223034 (Sec24b)
Membrane trafficking [BR:
prob04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127223034 (Sec24b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
HpaB
Motif
Other DBs
NCBI-GeneID:
127223034
NCBI-ProteinID:
XP_051041464
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MSAPAGSPHPAAGARMPPKLGGAASGLAPPQQNGPAPSQMQVPSGYGLPHQNYMAPSGHY
SQGPGKMTSLPLDSQCDNYYSRPYTVPTQNVGTPSSANQPGAQQMYGRGPPAPHVGGSTP
GSFQGAPASASHSYTSASQPYSSFGNRYSSSPATYSASSSASQGYPSTCSHYPISTVSNV
VYPNVSYPSLPASEPYGQMLTSQSAPSARPLKESYSGPSTAITYPSRPPPPPSQHHQQQQ
QSHSGYSSVPWSAPGLPPAQDNLIRSQMGSLAPANSHPSNNENVQPPKSSSVVSTVLPGP
SSTRMPPAPSHPVGPLPSAPPPPEQMQTKVRFPVPSHAGCGKWRLNRDPGLWGACIGRMR
ERPPEKFAIKGMQYGDYVNNQASSTPTPLSSASDDEEEEDEDEEAGVDSSSTTSSASPVP
SSYDALEGGSYPDMHSSSASSPAPDRALEPNPTVAQARSAAPTPTAPHPTKVAKPFGYGY
PTLQPAYQNAAPPPSSGGHPSGPGYPGYPQHYPGVNQLSSGLGGLSLQSSPQPESLRPVN
LTQEKNILPPTPIWAPVPNLSAELSKLNCSPDSFRCTLTSIPQTQALLNKAKLPLGLLLH
PFRDLTQLPVITSNTIVRCRSCRTYINPFVSFMDQRRWKCNLCYRVNDVPEEFLYNPLTR
SYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLSVLCQSLLEN
LDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLHESK
ELIKDLLNALPNMFINTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSR
EDPNQRSNTKVVHHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAG
CIFYYPSFHSTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRST
DLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSL
PDVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDPLSAYSSAVSSVPRSTLM
APSSLKLLPLYVLALLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLMKMIHPNLYRIDR
LTDEGAIHVNDRVVPQPSLQKLSAEKLTREGAFLMDCGSVFYIWIGKGCDNNFIENVLGY
PDFAAIPQKMTHLPELDTLSSERTRSFITWLRDSRPLSPVLHMVKDESPAKTEFFQHLIE
DRTEAAFSYYEFLIHIQQQICK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccccgccgggtcccctcacccggctgccggtgcccggatgccgcccaagctc
ggcggagcagcctctggcctggcgccgccgcagcagaacggtccagcaccaagtcaaatg
caagttccatctgggtacgggttgcctcatcaaaactatatggccccctcaggacattac
tctcaaggacctgggaaaatgacctcattgccattggatagccagtgtgataactactat
tctcgtccatatacagtaccaacacaaaatgtggggactcccagctcagcaaaccaacca
ggagcacagcaaatgtatggcagaggtcctcctgcccctcacgtggggggatccactcca
ggatctttccaaggagctccggcctcagcatcccattcgtatacgagtgcctcccagccc
tattcctcctttgggaatcgctacagtagtagtccggccacgtattctgccagctcttct
gcttctcagggatacccctctacgtgtagtcattatcctatctcaactgtttctaatgtc
gtgtaccctaatgtttcatatccctcactgcctgccagtgagccgtatgggcaaatgctt
acctcacagagtgctccgtctgccaggccacttaaagaatcgtattctggccccagcaca
gctattacctatccatcacgacctccgcctcctccttcccagcatcaccagcagcagcag
cagagtcattcaggatacagttctgtaccatggtcagctcctggccttcctcccgcccaa
gacaatctcatccgaagccaaatgggatccttggctccagccaacagccatccttcgaat
aatgaaaatgtccagccccccaagtccagctctgtagtgtccacagtcttgccaggaccc
tcatcaacaagaatgcctcctgctccgagtcacccagttggacctttgccctcagctcca
cctcccccagagcaaatgcagaccaaagtcaggtttccagtacctagccatgctggatgt
ggcaagtggcgcctgaacagagaccctggactgtggggagcttgcatcggtcggatgagg
gaacgccccccagagaagttcgcaattaaaggcatgcagtatggtgactatgttaataat
caagctagctccacaccaactcccttgtcatcagcttccgatgatgaggaagaggaggat
gaggatgaggaagcaggtgttgacagctcctccaccacaagcagtgcttcgcccgtgccc
agcagctatgatgccctggaaggaggcagctacccagatatgcattcctcttcagcaagc
agccctgctcctgaccgtgccctggaacctaaccccaccgtcgcccaggctcgatctgca
gctcctactcccacagctcctcaccccacaaaggtagcaaagccatttggctatggctat
ccgactcttcagcctgcttatcagaatgcagcaccacctccaagctccggtggacatccc
agtggcccagggtaccctggataccctcagcattacccgggtgtgaaccagctgtcctcg
ggtctaggaggactaagtctacagagttctccacagccagaaagcctcagacctgtgaac
ctcacccaggagaagaatatcttacctccgactccgatttgggctcctgtacctaacctg
agtgcagagctcagcaagctaaactgtagcccagattcattccgctgtaccttgacaagt
atcccacagacgcaggctttactgaataaagctaaacttcccttaggattgttgttacat
cccttcagagacctgacgcaattgccagtgataacgtcaaacaccattgtgaggtgccga
tcgtgccggacgtacatcaaccccttcgtgtccttcatggaccagcgaaggtggaaatgt
aacctgtgctacagggtgaacgacgttcccgaagagtttctgtacaaccccctgactcgg
tcttacggagagcctcacaaacggccggaagttcagaattcaactgtggagttcatcgct
tcctcggactacatgctccgtcctcctcagcctgctgtctacttgtttgttttagatgtg
tctcataatgcggtggaagctgggtacttgtcagttttatgccagtcgttactagaaaac
ttagacaagcttcctggagattcacgaacaagaataggattcatgacttttgacagcact
attcatttctacaacctacaagaaggcctgtcacagcctcagatgttgattgtgtctgat
atagacgatgtttttctgcccacaccggatagcttgcttgtgaatctgcacgaaagtaaa
gagcttataaaagacttactgaacgcattaccaaatatgttcatcaataccagagaaaca
cacagtgccctcggacctgcgcttcaggctgccttcaaactcatgtctcccacgggtggc
cgagtgtctgtgtttcagacacagttaccttccctgggggcaggacttctgcagtccaga
gaagatccaaatcagaggtcgaacaccaaggttgtgcaccatcttggccctgcaactgat
ttttataagaaacttgctttggattgctcaggacagcaaactgcagtggatttgttcctt
ctaagttcacagtattctgaccttgctagtttggcgtgtatgtccaagtactctgcaggg
tgcatattctactacccatctttccactctactcacaacccttcgcaagcagagaagtta
caaaaagacctcaaacggtacctcaccaggaaaattggatttgaagctgttatgagaata
agatgtactaaaggtctttcaatgcacactttccacggaaacttctttgtccgttccact
gacttgctgtctcttgccaacatcaatcctgatgctggatttgcagtgcagctgtcaatt
gaggagagcctgacagacacttcgttagtgtgctttcagacagccctgctgtatacatca
agcaaaggtgaacggagaattagagtgcatacactttgcttgccagtggtgagttcactc
ccagatgtctatgcaggagtggatgtgcaagctgccatctgcctgttggctaacatggct
gtggatcgctcggtgtcgtcaagcttgtcggatgccagggatgctctggtgaatgctgtg
gtggaccccctgtctgcctacagctcggcggtgtcgagtgtgccacgctccacgctgatg
gcacccagctcactcaagctgctcccactctatgtgttggcgctcctcaaacagaaagca
tttagaacgggtacaagtacacgcctggatgaccgtgtatatgccatgtgccagatgaag
tctcagccacttgttcatctgatgaaaatgattcatcccaacttatacaggatagacagg
ttgacagatgagggtgccatacatgttaatgacagggtagtacctcagccatcacttcaa
aaactgtctgcagagaagctgaccagagagggggctttcctcatggactgtggctcagtc
ttttacatctggattggcaaaggctgtgacaataactttatagagaatgtgcttgggtac
cctgattttgcagcaataccacagaaaatgacacatcttccggagctagacacgctgtca
tcagagaggactagatcctttataacgtggcttcgagacagccgaccattaagccctgtc
cttcacatggtcaaagatgagagtcctgccaaaacagagttttttcagcatttgattgaa
gaccgcacagaggccgcgttctcttactatgagtttctgattcacattcagcagcagatt
tgtaagtga
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