Phodopus roborovskii (desert hamster): 127223080
Help
Entry
127223080 CDS
T08852
Symbol
Abca4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127223080 (Abca4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127223080 (Abca4)
Transporters [BR:
prob02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127223080 (Abca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
127223080
NCBI-ProteinID:
XP_051041542
LinkDB
All DBs
Position
Unknown
AA seq
2251 aa
AA seq
DB search
MPSAGMLPWLQGIFCNVNNPCFQNPTPGESPGIVSNYNNSILARVYRDFQELFLDTPEIQ
HLGQVWAELCTLSQLMDTMRTHPETFAGRGLPIRDILKDEETLTLFLMRHIGLSDSVAHL
LVDSQVRVEQFAYGVPNLELKTIACSEALLQRFIIFSPYRGAQTVRDALCPLSQVTLQWI
EDTLYANVDVFKLFRVLPTLLDSNSQGINLRFWGGILSDMSPRLQKFINRPSVQDLLWVA
RPVLQNNGPETFTQLMDTLSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPTY
SYDKRTTSFCNSLIQNLESNPLTKIAWRAAKPLLMGKILFSPDSPAVRRLLKNANSTFEE
LDRVRKLVKAWGEVGPQIWYFFEKSTQMAMIRDTLGHPTVKDFINRQLGEEGITTEAILN
FFPNGPRESQADDMTNFDWRDIFNITDHFLHLANQYLECLVLDKFESYDDEVQLIRRALS
LLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
LRYIWGGFAYLQDMVEQGIIRSQTQAEVPIGVYLQQMPYPCFVDDSFMIILNRCFPVFMV
LAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTLFIM
HGRILHYSDPFILFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCF
AWQDRMTADLKTIVSLLSPVAFGFGTEYLVRFEEQGLGLQWNNIGKSPMEGDQFSFLLSM
KMLLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPEGMSDSFFERELPGLVPGVCVKNLVKVFEPGSRPAVDRLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAVRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGKSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDS
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKSIQSQRGVCEGACSCTSKGFSARCPARVDEVTEEQV
LDGNVKELMELVCHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLTDLGLS
SFGISDTPLEEIFLKVTEDSDSSSVFAGALQQKREHGSLQHPCSAPTEKVRQPAQTSHTC
FPGQVDPSKDQPSPAPEEPSAPLNTGARLILQHVQALLVKRFYRTARSHKDFLAQIVLPA
TFVFLALMLSVIVPPFGEFPALTLHPWMYGHQYTFFSMDEPSNEHLTVLADVLLNKPGFG
NRCLKKEWLPEYPCGNSTSWKTPSVSPNITHLFQKQKWTAAHPSPSCKCSTREKLTMLPE
CPEGAGGPPPPQRTQRSTEVLQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGIS
IGGKLPAIPVTGEALVGFLSDLGQMMNVSGGPVTREASREMLEFLKHLETKDNIKVWFNN
KGWHALVSFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAV
VAICVIFAMSFVPASFVLYLIQERMTKAKHLHFISGVSPTTYWLTNFLWDIMNYAVSAGL
VVGIFIGFQKKAYTSADNLPALVALLMLYGWAIIPMMYPASFLFDVPSTAYVALSCANLF
IGINTSAITFILELFEDNRTLLRFNAVLRKLLIALPHFCLGRGLIDLALSQAVTDVYAQF
GEEYSSNPFQWDLIGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWVAEPAREPIFDEDDDV
AEERQRVISGGNKADILRLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTT
FKMLTGDTTVTSGDATIAGKSILTNMSDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG
VPAQEIEKVANWGIQSLGLSLYADRLVGTYSGGNKRKLSTAIALIGCPPLLLLDEPTTGM
DPQARRMLWNTIVSIIRAGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKF
GDGYIVTMKIQSPKDDSLPDLNPVEQFFQGNFPGSVQRERHHSMLQFQVSSSSLARVFQL
LISHKDSLLIEEYSVTQTTLDQVFVNFAKQQTETYDLPLHPRAAGASWQAKLEGKAGRPE
TKEPVPQGSAEQPANINSPTAAEDKHTRCPQ
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggcaggaatgttaccatggctccaggggattttctgcaatgtgaacaaccct
tgttttcaaaaccccaccccaggagaatctcctggaattgtgtcgaactataacaactcc
atcttggcaagagtgtatcgagattttcaagagctcttcctggacacaccagagatccag
caccttggccaggtttgggctgagctctgcaccttgtcccagctcatggacactatgcgg
actcaccctgagacatttgcaggaaggggattaccaatccgagacatcctaaaggatgaa
gagacattgacattatttctcatgagacacattggcctgtctgactcggttgcccatctt
ctggtggactcccaagttcgtgtggaacagtttgcttacggagtcccaaacttggaactg
aagaccattgcctgtagtgaggccctcttgcagcgtttcatcatcttcagcccgtaccgg
ggggcacagacagtgcgtgacgccctgtgtcccctctcccaggtcaccctacagtggata
gaagacactctgtatgccaatgtggacgtcttcaaactcttccgggtgctccccacactc
ctagacagcaattctcaaggtatcaacttgagattttggggaggaatattatctgatatg
tcaccaagactgcaaaagtttattaatcgtccaagtgttcaagacttgctgtgggtagcc
agacctgtcctgcagaacaatggtcctgagaccttcacccagctgatggacaccctgtct
gacctcctgtgtggctacccagaaggaggaggctcccgggtgttctcctttaactggtat
gaagacaataactataaagccttcctggggattgactccacaaggaaagatcccacctat
tcttatgacaaaaggacaacatccttttgtaattcattgatccagaacctggagtcaaac
cctttaaccaaaatagcctggagggcagcaaagccattgctgatgggaaaaatcctcttt
tctccagattccccagctgttcgaaggctactgaagaatgccaactcaacttttgaagaa
ctggatcgagttaggaagctggtcaaagcctggggagaagtggggccccagatctggtac
ttctttgagaagagcacacagatggccatgatcagagacaccctgggacacccaacagta
aaagactttataaataggcagcttggagaagaaggtattaccactgaagccatattaaac
ttcttccccaacggtccccgagagagccaggctgatgacatgaccaactttgactggagg
gatatctttaacatcacagaccacttcctacacctggctaatcaatacctggagtgcctg
gtcctggataagtttgaaagctatgatgatgaagttcagctcatccgacgagccctgtct
ctcctggaggaaaacaggttctgggctggcgtggtattccctgacatgtatccctggacc
agctccctacctccccacgtgaagtacaagattcggatggacatagatgtggtggagaaa
accaataagatcaaagacaggtactgggattctggtcctagggcggatcctgttgaagac
ctccggtacatctggggaggctttgcctatctacaggacatggttgaacaaggaatcata
aggagccagacccaggcagaagttcctattggagtctatctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgcttccccgtcttcatggtg
ctggcgtggatctactctgtctccatgactgttaagggcattgtcttggagaaggaactg
aggctgaaggagaccttgaagaaccagggtgtctctaatgctgtgatttggtgtacctgg
ttcctggacagcttctccatcatgtcgatgagtatcttcctcctgacactgttcatcatg
catgggagaatcctgcattacagcgatcccttcatcctcttcctgtttctgttggccttc
tccacggcgaccatcatgcaatgcttcctgcttagtactttcttctccaaggccagcctc
gcagcagcctgcagtggggtcatctacttcaccctctacctaccacacattctgtgcttt
gcctggcaggaccggatgaccgctgacctgaagacgattgtgagcctgctttctcctgtg
gcatttggctttggcactgagtacctggtccgctttgaagagcaaggcctggggctgcag
tggaacaacattgggaagagccccatggaaggcgaccagttcagtttcctgctgtccatg
aagatgctgctgctcgatgccgctctgtatggcttactggcctggtatcttgaccaggtt
tttccaggagactatgggacgccacttccctggtacttccttctacaggagtcttactgg
cttggaggtgaaggttgttcgaccagagaagaaagggccctggaaaagactgaacctata
acagaggagatggaggatcccgagcacccggaaggaatgagtgattccttctttgaacgt
gagcttccagggttggtgccaggagtgtgtgtgaagaacctggtaaaggtttttgagcct
ggtagccggcctgctgtggaccgccttaacatcactttctatgagaaccagatcactgca
ttcctgggtcacaatggagcagggaaaaccaccaccttgtccatcctgacaggtctgttg
ccaccgacatcagggactgtgctcattgggggcaaagacattgaaaccagcctggatgcc
gtacgccagagtctcggcatgtgtccccagcacaacatcctgttccaccatctcacggtg
gctgagcatatcctgttctatgcccagctgaaagggaagtcctgggaggaggcccagctg
gagatggaagccatgttagaagacactggcctccaccacaagagaaatgaggaagctcag
gacctttcaggtggcatgcagaggaagctgtcggttgccattgcttttgtgggagattcc
aaggtggtggtcctggatgaacccacctctggggtggacccctactccaggcgctccatc
tgggatctgctcctgaagtatcgctcaggcagaaccatcatcatgtccacacaccacatg
gatgaggctgatctccttggcgaccgcatcgccatcatttcccagggaaggctctactgc
tctggaacaccactcttcctcaagaactgctttggcacaggcttctacttgaccttggtt
cgcaagatgaaaagcatccagagccaaagaggtgtctgtgagggggcctgcagctgtaca
tcaaagggtttctccgccaggtgtccggcccgggttgatgaggtaaccgaagaacaagtg
ttggacgggaatgtgaaagagctgatggagttggtgtgccaccatgttccagaggcaaag
ctggtggaatgcattggtcaagaacttatcttcctccttccaaacaagaatttcaagcag
agggcatatgccagccttttcagagagctggaggagacgctaactgacctgggactcagc
agctttggaatttctgacactcccctggaagagatttttctgaaggtcacggaggattct
gattccagctccgtgtttgcaggtgccctgcagcagaaaagagaacacggcagtctccag
catccttgctctgctcccactgagaaggtcaggcaacctgcccagacctcccacacctgc
ttccccggacaagtggatccttccaaggatcagccttccccagccccagaggagcccagt
gccccactcaacacaggcgcacggctgattcttcagcatgttcaggcgctgctagtcaag
agattctaccgtactgcccgcagccacaaggactttctggctcagattgttcttcctgcc
acttttgtgtttttggctctgatgctttccgtcattgtgcctccatttggtgaatttcca
gctttgacccttcacccctggatgtacgggcaccaatataccttcttcagcatggatgag
cccagcaatgaacacctcacagtgctggcagatgtcctcctgaacaaaccaggctttggc
aaccgttgcctaaagaaagagtggcttccggagtacccctgtggcaactcaacctcctgg
aagacgccttctgtgtccccgaacatcactcacctgttccaaaagcagaaatggaccgca
gcccacccctctccctcctgcaagtgcagcaccagagagaagctcaccatgctgcccgag
tgccctgagggtgctggagggcccccacccccacagaggacacagcgcagcactgaagtc
ctacaagacctcaccaacaggaacatctccgactacttggtaaaaacgtatcctgctcta
ataagaagcagcttaaagagcaaattctgggtcaatgaacagaggtatggaggaatctcc
atcggagggaaactccctgccatccccgttacaggggaagcacttgttggctttttaagt
gaccttggccagatgatgaacgtgagcgggggccctgtcaccagagaggcctctagagaa
atgttagagttcctcaaacatcttgaaaccaaagacaacattaaggtatggtttaataac
aagggctggcatgccctggtcagcttcctgaatgtggcccacaatgccatcttacgggcc
agcctgcccaaggacagggaccctgaggagtatggaataaccgtcatcagccagcccctg
aacctgaccaaggagcagctctcagagatcacagtgctgaccacttccgtggatgctgtc
gttgccatatgtgtgattttcgccatgtccttcgttccagccagctttgtcctttacttg
atccaggagaggatgacaaaagccaagcacctgcattttatcagtggtgtgagtcctacc
acctactggctgaccaacttcctctgggacattatgaattatgctgtgagtgcgggactg
gtggtgggcatcttcattggatttcaaaagaaagcctacacatctgcagacaacctcccc
gctctcgttgctctgctcatgctgtatggatgggcaatcatccccatgatgtacccagca
tccttcctgtttgatgtccccagcacagcctatgtggctttgtcttgtgctaacctgttc
atcggcatcaacaccagtgccatcaccttcatcctggaattatttgaggataaccggacg
ctgctcaggttcaacgctgtgttgaggaagttgctcattgcccttccccacttctgcctg
ggtagaggcctcattgacctggcgctgagccaagctgtgacagacgtctatgcccagttt
ggtgaggagtactcctccaacccattccagtgggacctgattgggaagaatctggttgct
atggcaatagaaggggtggtatactttctcctgacactcctcatccaacaccactttttc
ctcacccggtgggttgctgagcctgccagagagcccatttttgatgaagatgacgacgtg
gccgaagaaagacaaagagttattagtggggggaataaagccgacatcctaaggctaaat
gaactaaccaaggtttactcaggctcctccagtccagcagtagacaggttatgtgtcgga
gtccgtcctggagagtgctttggcctcctgggagtgaacggtgcaggcaaaacaaccaca
ttcaagatgctcactggggacaccacagtgacatcaggtgatgctaccatagcaggcaag
agcattttaaccaatatgtcagatgtccatcaaaatatgggctattgtcctcaatttgat
gcaattgatgacctactcacaggccgagaacatctttacctctatgccaggctgcggggt
gtgccagcacaggaaattgagaaggttgccaactggggtatccagagcctgggcttgtct
ctctacgctgaccgcctggtaggcacctacagtggcggcaataagcggaaactgtccact
gccatagctctcattggctgcccacccctgctgctgctggatgagcccacaacagggatg
gatccccaggcacgccgcatgctgtggaataccattgtgagcatcatcagagcagggaga
gctgtggttctcacctcccacagcatggaagaatgtgaagcgctgtgcacacggctggcc
atcatggtgaagggcacctttcagtgtctgggcaccattcagcacctcaagtacaagttt
ggagatggctacatcgtcacaatgaaaattcaatccccaaaggacgactcgcttcccgac
ttgaatcctgtcgagcagttcttccaaggcaacttcccaggcagtgtgcagagggagcgg
caccacagcatgctacagttccaggtctcttcctcctccctggccagggtcttccagctg
ctcatctcccacaaggacagcctgctcatcgaggagtactcagtcactcagaccacgctg
gaccaggtatttgtgaacttcgctaaacagcagacggagacctatgacctccctctgcat
cctcgagctgctggagccagctggcaagccaagcttgaaggcaaagctgggcggccagag
acgaaggagcctgtgccccagggatcagctgaacaacccgctaatataaacagccctact
gcagcagaagacaaacacacgagatgccctcagtga
DBGET
integrated database retrieval system
