KEGG   Phodopus roborovskii (desert hamster): 127223170
Entry
127223170         CDS       T08852                                 
Symbol
Larp1b
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1B
  KO
K18757  la-related protein 1
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prob03019]
    127223170 (Larp1b)
Messenger RNA biogenesis [BR:prob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127223170 (Larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 127223170
NCBI-ProteinID: XP_051041641
LinkDB
Position
Unknown
AA seq 1027 aa
MSARAPVPAAAPREDPPAVAGDRDALLAAASRRAEQPAPGEREGKEAREERAAAATSAGA
RGEPSPALVLGHSVPQAAVPVRPLALHLAHKARAPGGPFGGEAPPPPPPPPAPRDPSEDA
REDSAAGGPEDKPPPPPKGNPWTKKLPQHLSPVGTGAPPPAQDAPEAELSSPKIIKAGKL
KTKKSNKASDFSDMANWPTPGELVNTGSQSVSSQGNKKPQFRKEKEEKIEKRSNNESKEN
REAKLDGPVENVSEDEAQSSNQRKRANKHKWVPLHLDDVRPDSQERPGSRNSSRCQPEAN
KPAHSNRKSDTRSWRRDREKRDDQDEVSSVRSEGGTIRGSARGRGRGRGRGRGRGRGNTR
LNFDYSYGYREPGERTDQPFPTELNTSMMYYYDDGTGVQVYPVEETLLKEYIKRQIEYYF
STENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNLNLILEALKDSTEVEIVDEKMR
KRIEPEKWPIPGPPPRNVPQTDFSQLIDCPEFIPGQAFGSHTESALNSPRIGSPLSPKKH
TETSIIXVMSRGLSTSLPDVDSEPWIDVKEMHRPSLMTLKKSISVSEETSNQLAFPEEPE
QEREFLFDEEMEQTDRKTKTWFDXSDNDSDYEIDDQDLNKILIVTQTTPPYMRKHPRGDR
TGTHSSRVSIPSELAEVINDGLYYYEQDLWTEGENTRTAIKVTISEMISATETHTMPSVV
PASXQIHPSWTPKAHXMCLLQDPNKILRFYPVVKEPRAIMXSPRKRKTSHSTNPPLDCHV
GWVMDSRDHGPRPPSVSSSNASPSEGAPLTGSCSCTPHSFPKFQHPSHELLKENGFTQQV
YHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLAWEDAKENYRY
GLECLFRFYSYGLEKKFRQEIFKDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSVDP
KLQEYLCSFKKLEDFRVDPPISEEFGRKRHSSTYGEESNHHRLPSRPSTPPSAASASEPQ
EKSSGTQ
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgtccgctcgcgccccggtgcccgccgctgccccccgggaggacccgcccgccgtggcc
ggcgaccgggacgcgctgttggcagcggcgagccggcgggcggagcagccggcgccgggc
gagcgggagggcaaggaggcgagggaggagcgggccgcggccgccaccagcgcgggggcg
cggggagagccgtcgccggcgctcgtgctgggacacagcgtgccgcaagcggccgtgccc
gtgaggccgctggcgctgcacctggcacacaaggcgcgcgcgcccgggggtcccttcggc
ggggaggccccaccgccaccgccgccgccgccagcaccgcgggacccttcagaggacgcc
cgagaggactctgcggcaggcggccccgaggacaagccgccgccgccgccaaaggggaac
ccgtggaccaagaagctgccgcagcacctgtcccccgtgggcaccggcgcgccgccgccc
gctcaggacgccccagaggccgagctcagctccccaaaaattataaaagcgggaaaactc
aagacaaagaaatccaacaaggctagtgacttcagtgatatggcaaactggccaacacca
ggtgaactagtgaacacagggtctcagagtgttagcagccaaggaaataagaagccacaa
tttagaaaagaaaaagaagagaagattgaaaaaagaagcaacaatgagagcaaagagaac
cgggaagcaaaactagatggtcctgttgagaatgtcagcgaggatgaggcccagtcaagc
aaccagcggaagagagctaacaagcacaaatgggtaccactccacttagatgatgtgaga
ccagacagccaggaaagacctgggtcccggaacagctctagatgtcaacctgaagcaaac
aaaccagctcacagtaataggaaaagtgatacacgaagttggagacgggatagagaaaag
agagatgatcaagatgaagtatccagtgtgagaagtgagggtggtaccatccgaggttct
gcaagaggccggggaagaggccggggccggggaagaggccgaggtcgaggaaacactaga
ttgaactttgattattcatatggttatcgagagccaggggaaagaactgatcaaccattt
cccacagagctaaacaccagcatgatgtattactatgatgatggcacaggtgtacaggta
tatcctgtggaagaaacattgcttaaagagtacattaagcgacaaattgagtattacttc
agcacagagaacttggagcgggatttctttcttcgcagaaagatggatgagcagggattc
ctgcccatttccctgattgctggttttcaccgtgtacaagcgctcaccacaaaccttaat
ctcatcttagaggcactgaaggatagtacagaagtagaaattgtggatgagaaaatgagg
aaaaggatagaaccagaaaaatggccaatcccaggccctcctccacgaaatgtgccacaa
acagacttctctcagttgattgattgtccggagttcataccaggccaggcctttggctcc
catacagagtctgctctaaactctccaagaattggaagtccactgagcccaaagaaacat
acagaaacaagtattatctgagtgatgtctagaggtttgtctaccagcttacctgatgtg
gactcagaaccatggatagatgtgaaagagatgcatcgtccatctctgatgacattaaag
aaatcaatatctgtatctgaagagacatcaaaccaactagcctttccagaagaaccagaa
caagaacgggagtttttgtttgatgaagagatggaacagacagacagaaagacaaagaca
tggtttgattgatctgataatgattcagattatgaaattgatgaccaagatttaaacaag
attttaatcgtaactcagacaaccccaccttatatgagaaagcaccctagaggagatcga
acaggcacccattcatcacgagtaagcattccatcagaacttgctgaagtgatcaatgat
ggcctatattactatgaacaggacctgtggacagaaggtgaaaatacacgcacagccata
aaggtaacaatttctgaaatgatttcagcaacagagactcacacaatgccctctgtagtt
cctgcttctntccagattcatccttcatggactcccaaagcacattgaatgtgtctgctg
caagatcctaataaaatactgagattttatcctgttgtcaaagaaccaagagccatcatg
taaagtccacgaaagaggaagacaagtcacagcacaaacccccctctagactgtcacgtt
gggtgggtgatggattccagggaccatgggccaagaccaccctctgtcagcagttcaaat
gcttcaccttcagaaggtgcaccactcacaggaagctgcagctgcactcctcactcattc
ccaaagttccagcatccttctcatgaactgctgaaggaaaatggattcacccaacaagtg
taccacaagtatcgtcgaaggtgtttaagtgagagaaaacgtttgggaattggacagtca
caggaaatgaacaccctctttcgtttctggtccttcttcctcagagaccacttcaatagg
aaaatgtatgaggaatttagacaacttgcttgggaagatgcaaaagaaaattacaggtat
gggttagagtgtcttttcaggttttatagttatggactggaaaaaaaattcagacaagaa
atttttaaggattttcaagaagaaaccaaaaaagactacgaatctggccagctatatgga
ctggaaaaattttgggcctatttgaaatattctcaatctaagacacagtctgtggaccca
aaacttcaggagtacctctgtagttttaagaagttagaagacttccgtgttgatccccct
attagtgaggaatttggaagaaaaagacattcatctacttatggggaggagagtaatcac
catagacttccatctcgcccctccacaccaccaagtgctgcatctgccagtgaaccgcag
gagaaatcctcaggcacccagtga

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