Phodopus roborovskii (desert hamster): 127223324
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Entry
127223324 CDS
T08852
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04390
Hippo signaling pathway
prob04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
127223324 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
127223324 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127223324 (Sox2)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127223324 (Sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127223324
NCBI-ProteinID:
XP_051041780
UniProt:
A0AAU9ZBT3
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MYNMMETELKPPGPQQASGGGGGGNATAAATGGNQKNSPDRVKRPMNAFMVWSRGQRRKM
AQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTL
MKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQEQLG
YPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGS
MGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHYQ
SGPVPGTAINGTLPLSHM
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacggagctgaagccgccgggcccgcagcaagcttcggggggc
ggcggcggcggcaacgccacggcggcagcgaccggcggcaaccaaaagaacagcccggac
cgcgtcaagaggcccatgaacgccttcatggtgtggtcccgggggcagcggcgtaagatg
gcccaggagaaccccaagatgcacaactcggagatcagcaaacgccttggcgccgaatgg
aaacttttgtcggagaccgagaaacggccgttcatcgacgaggccaagcggctgcgcgct
ctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacgctc
atgaagaaggataagtacacgcttcccggagggctgctggccccgggcgggaacagcatg
gcgagcggggttggggtgggcgccggcctgggcgcgggtgtgaaccagcgcatggacagc
tacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggagcagctgggc
tatccgcagcacccgggcctcaacgcgcacggcgcggcgcagatgcagcccatgcaccgc
tacgacgtcagcgccctgcagtacaactccatgaccagctcgcagacctacatgaacggc
tcgcccacctacagcatgtcctactcgcagcagggcacccccggcatggcgctaggttcc
atgggctcggtggtcaagtccgaggccagctccagcccccccgtggttacctcttcctcc
cactctagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctccct
ggcgccgaggtgccggagcccgctgctcccagtagactgcacatggcccagcactaccag
agcggcccggtgcccggcacggccattaacggcacactgcccctgtcgcacatgtga
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integrated database retrieval system
