KEGG   Phodopus roborovskii (desert hamster): 127223382
Entry
127223382         CDS       T08852                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:prob04121]
    127223382 (Hltf)
   03400 DNA repair and recombination proteins [BR:prob03400]
    127223382 (Hltf)
Enzymes [BR:prob01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127223382 (Hltf)
Ubiquitin system [BR:prob04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127223382 (Hltf)
DNA repair and recombination proteins [BR:prob03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    127223382 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 ResIII DEAD RING_XB3-XBAT31 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 zf-Nse Prok-RING_4 HDA2-3 zf-rbx1
Other DBs
NCBI-GeneID: 127223382
NCBI-ProteinID: XP_051041881
UniProt: A0AAU9ZBZ3
LinkDB
Position
Unknown
AA seq 1000 aa
MDPVWKYLQSVQYGTHGNFRRLSYPTFFPRFEFQDIIPPDDVLTSDEELDSILFGTLRGQ
VVGLRYYTGVVNNNEMVSLQREPNNPYDKNAIRVNNVNGNQVGHLKKELAAALAYIMDNK
LAQVEGVVPFGANNTFTMPLHMTFWGKEENRKVVLNQLTKHGFKLGPTPKTLGLSLENSW
SSGRAGPSYNMPVHVAVQMTTDQLKTEFDKLFEDLKEDEKTSEMEPAEAIETPLLPHQKQ
ALAWMILRENSKDLPPFWEQRNDFYYNTITNFSEKERPENVHGGILADDMGLGKTLTAIA
VILTNFADGKPLLNKRSKKNQPRKVYKDETVKLGGSNTNKEADELSTELSRCSEEPGVSD
IQENKKYPMSELSSICPKRRKIAVQYIESSDSEEIETSELPQTMKGKLKNTQSDTKSRVK
GYSKVKEDTGFSHAFISSSSATKKKMLKKGTSVMEGSKKRDTGETARTTLIICPLSVLSN
WIDQFGQHIKSEVHLNFYVYYGPDRIRHPAFLSKQDIVLTTYNILTHDYGTKDDSPLHSI
KWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFI
DREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQYIT
LSEEERKIYQSVKNEGKATIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHILTNGMSSS
GPSGNDTPEELRNILIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQ
SEQPHAKCPLCRNNIHGDNLLECPPEELACDSEKKSKMEWTSSSKINALMHALIELRTEN
PNIKSLVVSQFTTFLSLIETPLKDSGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIML
LSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEEN
MLKIQNTKRELAAGAFGTKKTDANEMKQAKINEIRTLIDL
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggatcctgtttggaagtatttgcagtctgtccagtatggaacccatggaaattttcga
agactttcatacccaactttctttccacgctttgaattccaagacattatccctccggat
gacgtcttaactagtgatgaagagctagattccattttatttggaactttgagaggtcaa
gttgttggactgcgctattacacaggagtagtaaataataatgaaatggtttctttacaa
cgagagcccaataatccatatgataagaatgcaattagagtaaataatgtgaatggaaat
caggttggtcatttaaagaaagaacttgctgctgccttggcctatatcatggataacaaa
ttggcacaagtggaaggggtagttccctttggtgcaaataatacttttaccatgcctctt
catatgacattttggggaaaagaagaaaatagaaaagtggttttaaatcagttgacaaaa
catggatttaaattgggtcccacaccaaaaactttaggattgagtttggaaaatagttgg
agctctgggagagctggaccaagctataatatgccagttcatgttgcagtacagatgaca
actgaccagctcaaaacggaatttgacaaattatttgaagatttaaaagaagatgagaaa
actagtgaaatggagccagctgaggctattgagaccccattgcttccacaccaaaaacaa
gctctggcttggatgattttacgagagaacagcaaagaccttccaccattctgggaacag
cgaaatgacttctattataacacaataacaaatttttctgaaaaagaacgaccggaaaat
gtccatggaggaattttagctgatgatatgggtttgggcaaaactcttacagccattgca
gtaattcttaccaactttgctgatggcaagcctcttctcaataaaagaagcaagaagaat
cagccaagaaaggtatacaaggatgagactgtcaaactgggaggaagtaatactaacaaa
gaggcagatgaactaagcacagagctatccagatgtagtgaagaacctggtgtttcagat
attcaggaaaataagaagtatcctatgtcagaattgtctagtatctgccctaaaagaaga
aaaattgctgttcagtacattgaaagcagtgattcagaggaaatagaaactagtgaactg
ccacagacaatgaaaggcaagctaaaaaatacacagtcagatactaaaagtagagtaaaa
ggatattctaaggttaaagaagatacaggattttctcatgcatttatttcatcctcttct
gcaacaaagaagaaaatgttgaaaaaggggacatctgtgatggagggctcaaagaaacgt
gacactggagagacggcaagaacaacattgatcatctgtccactttctgtgctgagcaat
tggattgaccagtttggacaacatataaaatcagaagtgcacttgaatttttatgtttat
tatggccctgatcgtattagacatccagccttcctttcaaaacaggatattgttttaaca
acttataatattttaactcatgattatggaactaaagatgatagtccattacatagcata
aaatggctaagagtgatcctggatgaaggacatgccatacgaaatccaaatgctcagcag
acaaaagctgtacttgacttagaggcagaaagaagatgggtattgacaggtacacctatc
cagaattctttaaaggacttgtggtctcttctgtcctttttaaagcttaaaccgtttatt
gatagagaatggtggcatagaacaatacagcgtcctgttacaatgggagatgagggagga
cttaggcgtttacagtccttaattaaaaatatcacccttcgaagaacaaagacaagcaaa
attaaagggaaacctgttttggagctgccagaaaggaaagtatttattcagtacattaca
ctttcagaagaagagagaaagatttatcagtctgttaaaaatgaaggcaaagctaccata
ggaaggtattttactgaagggactgtccttgcacactatgcagatgtcttgggtcttctg
cttagattgcggcagatttgttgtcatactcatattcttacaaatggaatgtcttcaagt
ggtccttctggaaatgatacacctgaagaactgaggaatatattaataaagaagatgaag
ttaattctgagctctggttcagatgaagaatgtgcaatttgccttgattcattaacagtt
cctgtgataacacattgtgcacatgtgttttgtaaaccttgtatctgccaggtcattcag
agtgagcagccacatgctaaatgccctttatgcagaaataatatacatggagataattta
ttagaatgtcctccagaagaattggcatgtgacagtgagaaaaaatccaaaatggaatgg
acatccagttcaaagattaatgctctaatgcatgctttgattgaattacggacagagaac
cccaacataaaaagtttagttgtttctcagtttaccacattcctgtctttaatagaaaca
ccacttaaagactcaggatttgtgtttactcgtttagatggttccatggctcaaaagaaa
agagttgagtcaattcagtgttttcaaaacacagaagcaggatctccgactataatgcta
ttgtccttaaaagcaggtggagttggcttgaatctttgtgcagcttctcgggtattctta
atggatccagcctggaaccctgctgccgaagatcagtgctttgacagatgccatagactt
ggccaaaagcaagaggttatcatcacaaaattcattgtaaaggattctgttgaagaaaat
atgttgaaaatacaaaacacaaaaagagaacttgcagctggagcttttggaactaaaaaa
acagatgctaatgaaatgaaacaagctaaaatcaatgaaatccgaactttaattgattta
taa

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