Phodopus roborovskii (desert hamster): 127223384
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Entry
127223384 CDS
T08852
Symbol
Znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127223384 (Znfx1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
DEAD
IstB_IS21
PhoH
nSTAND3
AAA_16
AAA
HOOK_N_NuMA
Motif
Other DBs
NCBI-GeneID:
127223384
NCBI-ProteinID:
XP_051041887
UniProt:
A0AAU9YN97
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
MDDRRPHLEARPRHPPPSHRGPVDGEVPPRARNQTSNPAASALRGGTNHPGRHPQASNHP
VPFRQREERFRAMGRNPHQGRRNQEGHASDEAGDQRQSQNDTRRRNDNQEGRNHRPPWSN
DNFQQWRSPHQKSAEQPQQTKRLGYKFLESLLQKEPSEVAITLATSIGLKELLSYSSMKP
SFLELICQVLRKACSSRIDRQSILHVLGILNNSKFLRVCLPAYVVGMITEPIPDIRNQYP
EHISNIISLLQDLVSVFPASSVQETSMLISLLPASLNALRASGVDIEEETEKNLEKVQTI
VEHLQEKRREGTLKVDTYTLVQTEAEGQVESYRDMPIYPTYNEVHLDERPFLRPNIISGK
YESTAVYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDARIITPMC
SASGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREHEDLCRGI
VQLCFNEQSQQLLADVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECDS
HVEEPRYLLMGGRYDFTPLMENPSATGECLRGARVFRRTRVNVLDFSQWPSKETLKLDDS
QMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISAQKFPILVVCYTNHA
LDQFLEGIYRCQKTSIVRVGGRSSSDALKQFTLRELRNKREFRRNLPMHLRRAYMSIVTE
MKESEQELQEGAKTLECTMRGVLREQHLEKYISPQHWDSLMNGPMQDADWLCVQPSNHSM
MLEWLGLGVGSFTQSSSPAGPESTAQAEGEEEEEGEEEGSLIEIAEEADLIQADRVIEEE
EVVRPRRKKKEENAVDQELAKMLLAMRLDQYGPVTTAGQEQATEEWETQRNQKRKMKRRV
KVELLKLNTMTEAEANAIQDIWQLDLNTRWQLYRLWLQMYQADTRRKILSYERHYRTSAE
RMAELRLQEDLHILKDAQIVGMTTTGAAKYRQILQQVEPRIVIVEEAAEVLEAHTIATLS
KACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNHQHRMRPEIAR
LLTPHIYQDLENHPSVLKYEQIKGVSSNLFFVEHNFLEQDIQEGRSHQNQHEAHFVVELC
QYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGIKVHVVDKYQGEENDIILLSLVR
SNLEGKVGFLQIPNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPSLR
LCCQNHPDTHTLVSKASDFQKVPEGGCSLPCEFRLACGHVCTRACHPYDSSHKEFQCMKP
CQKVICPDGHRCPLVCFQECQSCQVKVPKIILRCGHKQMVPCSVPESDFCCQEPCSKVLR
CGHSCSHLCGEDCVRLCSEKVTVKLKCGHSQQVKCGNVEDLKYGLSVKCTTKCDTILDCG
HPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCKRK
CGELCSPCVEPCVWRCQHYQCTKLCSEPCDRPPCYVPCTKLLACGHPCIGLCGEPCPKKC
RVCQLDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCPIC
QVPIRKNLRYGTSIKQRLEEIEIVKEKIQGSAGEIAATQEQLKALLKSKTLFLQLRSEEF
LMLEEKLAQKNLSVKDLGLVENSISFYDHLANLEGSLKKVDYLERQRVSARLEQVHEWLA
KKRLSFSSQELSDLQSEIQRLTYLVTLLVRCKMAKEKVKGSVAEEVSSIRNILEKTCKFT
QEDEQLVQKKMDALKTTLPCSGLGISEEERVQIVTALGVPRGHWFKCPNGHIYVITECGG
AMQRGTCPECQEVIGGENHTLERSNHLAPEMDGAQHPAWSDTANNLMNFEEIRRMM
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagaagaccacatctggaggccaggcccaggcatccccctcccagccacaga
ggtcctgtagatggagaagtaccaccaagagctagaaatcaaaccagtaacccagcagca
agtgcactccgtggcggaaccaaccatcctggaaggcatcctcaggccagcaaccatcct
gttcctttccggcagagagaagagagatttagggctatgggcaggaacccacatcaggga
agaagaaaccaggaggggcatgccagtgatgaagctggagaccagagacaaagccagaat
gataccaggaggagaaatgacaaccaggaaggtaggaaccacagaccaccatggtccaat
gataacttccagcagtggcggagcccacaccagaagtcagcagaacagccacagcagaca
aagagactgggctacaagtttctggagagtcttctgcaaaaagagccctctgaggtagcc
atcacacttgccacaagtatagggctcaaggagctgctttcctattcttccatgaaaccc
agcttccttgagctgatctgccaagttctccgaaaggcttgtagctccaggatagaccgt
cagagcatcctgcatgtgctgggcatcttgaacaactcaaagttcctcagagtctgcctg
ccagcttatgtagtgggaatgattactgagcccatccctgacattcgaaaccagtatccc
gaacacataagcaatatcatctctcttctccaggaccttgtcagtgtcttccccgccagc
tctgtgcaggaaacttccatgctcatatctctcctgccagcctctcttaatgctttaaga
gcctctggagttgacatagaagaggagacagagaagaatctggaaaaggtgcagaccatt
gttgaacatctgcaggaaaagaggcgagagggcactttgaaagtggacacttacactcta
gtgcagactgaggcagaaggccaggttgagagctaccgggacatgcccatctacccaacg
tacaatgaagtgcacttggatgagaggcccttccttcgccccaacatcatttctgggaaa
tacgagagcactgctgtttacctagacactcacttccgcctccttcgagaggattttgtc
aggccccttcgagaaggcattttggagcttctacaaagctttgaggaccagggtctgagg
aagaggaagtttgatgacatccgaatctattttgatgccagaattatcacccccatgtgc
tcagcatcaggcattgtgtacaaagtgcagtttgacacaaaaccactgaagtttgttcgt
tggcagaattccaagcgactactctatgggtcattagtgtgcatgtccaaggacaacttt
gagacgtttctttttgccactgtttcaaaccgggagcatgaagatctctgccgaggaatt
gtccagctgtgcttcaacgagcagagccagcagctgctcgcagatgtccagccctcagac
tctttcctcatggtagagacaacagcctactttgaggcttacagacacgtcctagaagga
ctccaggaggtccaggaggaagatgtccccttccagaggaatattgtggagtgtgactcc
catgtagaggagccaaggtacttgctaatgggtggcagatatgatttcacccccctaatg
gagaacccctcagccactggggagtgcctgaggggtgccagggtctttcgccgtactcga
gttaatgtcttagacttcagccagtggccctcaaaagagaccctgaagttggatgactca
cagatggaagccttacaatttgctctcacaagggagctggctatcatccaaggacctcct
gggacaggcaaaacttacgtgggtctaaaaattgtccaggcccttctgaccaacgagtct
gtttggcaaattagtgcccagaagttccccatcttggttgtatgttatactaatcatgct
ttggaccagtttctagaaggcatttacaggtgtcagaagaccagcattgtgcgagtgggt
ggaaggagcagcagtgacgccctgaagcagttcaccctgagggagctgaggaacaagcgg
gaattccgccgcaacctccccatgcacctgcgaagggcctacatgagtattgtgacagaa
atgaaggagtcggagcaagaacttcaggaaggggccaagaccttggaatgcactatgcgt
ggtgtccttcgggagcaacacctggagaagtacatctctccccagcactgggacagcctc
atgaatggacctatgcaggatgctgactggctctgtgtccagccctcaaaccattccatg
atgcttgaatggctgggccttggtgtgggctcttttacccagagttcttctccagcagga
cctgagagcacagcccaggcagaaggagaagaggaggaggaaggggaagaggagggctcc
ctgatcgagattgcagaggaagccgacctgattcaggcagaccgagtgattgaagaggaa
gaggtggtgagacctcggcggaaaaagaaggaagagaatgcggtggaccaggagttggct
aaaatgcttttggccatgagactagaccagtatgggcctgtaactacggctggacaggag
caagctacagaagagtgggagacccagcgtaaccagaaaaggaaaatgaagagaagagtg
aaggttgagcttctcaaactgaacactatgactgaggctgaggccaatgccatccaggac
atctggcagctggacctgaatacccgctggcagctttataggctgtggctgcagatgtac
caagctgacactcgccggaagatcctcagctatgaacgccattaccgcacatcagcagaa
agaatggctgagctaagactccaggaagacttgcacatccttaaagatgcccagattgtg
ggcatgacaaccacaggtgctgccaagtaccgccagatccttcagcaggtggaacctcgt
atcgtcattgtagaagaggctgccgaggttcttgaggcccacaccattgccacgctaagt
aaagcttgccagcatctcattctgattggggaccatcagcagctgcgtcccagtgctaat
gtatatgatctggccaagaactttaaccttgaggtgtccctgtttgagcgactagtaaaa
gtgaacatccccttcgtccgtctgaatcaccagcaccgcatgcggcccgagattgcccgt
cttttgaccccccacatttaccaggatctggagaaccatccctctgttctcaagtatgag
cagattaagggggtctcctccaaccttttctttgtagagcacaactttcttgaacaggat
atccaagaaggcagaagccatcagaaccagcatgaggcacactttgtggtggagctgtgc
cagtacttcctgtgccaggagtacctgccctcccagatcaccatcctcaccacctacact
gggcagcttttctgcttgcgcaaactcatgcctgccaagacatttgctggcatcaaggtc
cacgtggtggacaagtaccaaggggaagagaatgacatcatcctcctctcgctagtgcgg
agcaacctagagggaaaggtgggcttcctccagatccccaatcgaatctgtgtagcctta
tcccgggccaagaagggcatgtactgcattgggaacatgcagatgcttgccaaggtgccc
ttgtggagcaagatcatccatacccttcgagagaacaaccaaataggcccatccctccgc
ctctgttgccagaaccaccctgacacccataccctggtatccaaagcttctgatttccaa
aaagtaccagaaggaggctgcagcctgccctgtgagttccggttggcctgcgggcatgtg
tgcactcgtgcctgccacccatatgactcctcccacaaggagttccagtgcatgaagcca
tgccagaaagtcatctgcccagatgggcaccggtgcccactcgtttgcttccaggagtgt
cagtcttgtcaggtgaaagtgcccaaaatcattcttcggtgtggtcacaaacagatggtt
ccttgctcagtgccagagtcagatttttgctgccaggagccttgctccaaggtactaaga
tgtggccacagttgcagccatctgtgtggtgaggattgtgtgcgactatgttcagaaaag
gtcactgtgaagcttaagtgcgggcacagtcagcaggtgaagtgtggcaatgtagaagat
ctaaaatatgggctgtcagtcaagtgcactaccaagtgtgacaccatcctagactgtggc
catccttgcccaggctcctgtcacagttgctttgaagggcgcttccatgagcgctgtcag
cagccctgcaagcgcctgctcatctgctcacacaagtgccaggagccctgcattggtgag
tgcccaccctgccagcggacatgtcagaaccgctgtgtccacagccagtgcaagaggaag
tgtggggagctatgcagcccttgcgtggagccctgtgtctggcgctgccagcactatcag
tgcaccaaactctgctcagagccctgcgaccggcccccgtgctacgtgccttgtactaag
ctgctggcttgtggtcatccttgcattggtctgtgtggggagccatgtcccaagaagtgc
cgtgtctgccaactggatgaggtcacccaaatcttttttggctttgaggatgagcctgat
gcccgctttgtgcagctggaagactgtagccacatctttgaggtgcaagccctggaccgc
tacatgaatgagcagaaggatgatgaagtcgccatcaggttgaaggtctgtcccatttgc
caggtacccatccggaaaaacctgaggtatggaaccagcatcaaacagcggctggaagag
atagaaattgtcaaggagaagatccagggctctgcaggagagattgcagccacccaggaa
caacttaaggccctgctgaagagtaaaactctgttcctccagctgcgctctgaagagttc
ctgatgctcgaagagaagctggcccagaagaacctgtcagtgaaggacctgggccttgtg
gagaattccatcagcttctatgaccacttggccaacctggaagggtccctgaaaaaggtg
gattacttagaacgtcagagagtgagtgctcgactcgaacaggtccacgaatggctggcc
aagaagcgcctcagcttcagcagccaggaattgagcgacctccagagtgaaatccagagg
cttacctatcttgtgaccctcctggtgcgctgcaagatggcaaaggagaaggtgaaaggc
agcgtagcagaagaggtctccagcatccggaatattctcgaaaaaacatgtaagttcacc
caggaagacgaacagcttgtgcagaaaaagatggacgctctgaaaactacccttccctgc
tctggcctggggatctcagaggaagaaagggtgcagattgtcaccgccttgggtgttcct
cgtggccattggttcaagtgtcccaatggccacatctatgtgatcactgagtgtggggga
gccatgcagagaggcacctgtcctgagtgccaggaggtgattggtggtgaaaaccatact
ctggagaggagcaaccatctggcccctgagatggatggagcccagcaccctgcctggtca
gacacagccaacaacctgatgaacttcgaggagatccggaggatgatgtaa
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