Phodopus roborovskii (desert hamster): 127223419
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Entry
127223419 CDS
T08852
Symbol
Colgalt2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00310
Lysine degradation
prob00514
Other types of O-glycan biosynthesis
prob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127223419 (Colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127223419 (Colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prob01003
]
127223419 (Colgalt2)
Enzymes [BR:
prob01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
127223419 (Colgalt2)
Glycosyltransferases [BR:
prob01003
]
O-Glycan biosynthesis
O-linked Gal type
127223419 (Colgalt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
127223419
NCBI-ProteinID:
XP_051041945
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MAARRATVACALLLLLSSALLRRGCRARFAAEPDADEDGEETVAFPESSLQSPTVLVAVL
ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLRNVQRQYHYVEWRP
MDEPESYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLTL
MIAENRTIVAPMLESRGLYSNFWCGITPQGFYKRTPNYLQIREWKRMGCFPVPMVHSTFL
IDLRKEASNNLAFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNKEHYGYLPIPLKPHQ
TLQEDIENLIHVQIEAMIDRPPMEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKALNTSQLKAWNIEMLPGYRDPYSSRPLTRGEIGCFLSHFSI
WKEVIDRGLEKTLVIEDDVRFEHQFKKKLMKLMDDIDKARLDWELIYIGRKRMQVKEPEK
AVPNVVNLVEADYSYWTLGYVISLEGAQKLVGADPFGKMLPVDEFLPIMYNKHPVAEYKE
YYEPRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHSWKSRKQGH
IHSNAKNTEALPPPTSLDTVPSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgacgcgccacagtcgcctgcgcgctgttgctgctgctgtcctccgccctg
ctccgccgcggctgccgggcgcgcttcgctgctgagcccgatgcggatgaggatggagag
gaaacggtggcgttccccgagtcgtccctacagagccccacggtgctcgtggctgtcctc
gcccgcaacgccgcgcacacgctgcctcacttcctcggctgcctggagcggctagactat
cccaagagcaggatggccatctgggcagccactgatcacaatgtggataatacaacggaa
atactcagggagtggttgagaaatgtccagagacaatatcactatgtggagtggaggcct
atggatgagccagagtcttaccctgatgaaatcggaccaaagcactggccaagctcccgg
tttgcccatgtcatgaaactgcgacaggcagcccttcgaactgcgagggaaaaatggtca
gactacatcctgtttatagatgtcgacaatttcctgactaatccacagaccctgacccta
atgattgcagagaacagaaccattgtggcccccatgctggaatcccggggcctgtattct
aacttctggtgtggaatcacacctcagggcttctataagcggacacccaactaccttcag
attagagagtggaagaggatgggctgcttcccagtccccatggtccactccaccttcctg
attgacctcaggaaagaggcctccaataatctggctttctaccccccacaccaggactac
acctggacctttgatgacatcattgtttttgccttctccagcaggcaagcaggcatccag
atgtacctatgcaacaaagagcactatggctacctgcccatccctctgaagccccatcag
acgctgcaggaagacatcgagaacctcatccatgtgcagatagaagcaatgattgatcgt
cctccaatggaaccgtcacagtttgtgtcagttgtccctaaatatccagacaagatggga
tttgacgagattttcatgattaacctcaaacgcaggaaggacaggcgggaccggatgctg
cgcacactctatgagcaggagattgaagtcaagatcgtggaggctgtcgatgggaaggca
ctcaacacaagccagctgaaggcctggaacattgaaatgctaccagggtaccgtgatccc
tactcctcgaggcctttaacacggggcgaaattggctgcttccttagtcacttctctatc
tggaaagaggttattgacaggggactggagaagacgctcgtcattgaggacgacgtgcgt
tttgagcatcagttcaagaagaagctaatgaagctgatggatgacattgacaaggctcgg
ctggactgggaactgatttacatcggtaggaaaagaatgcaagtcaaggagccagagaaa
gctgtgcccaatgttgtaaatctggttgaagctgactattcctactggacgctgggctat
gtcatctctttggagggagcacagaagcttgttggagctgatcccttcgggaagatgttg
ccagtggatgagtttctgccaatcatgtacaacaagcatcctgtagcggagtacaaggag
tattatgaacccagggacttgaaagccttctctgcagagcccttgctcatctaccccaca
cactacacaggccagccgggttatctgagtgacacagaaacttcaaccatctgggacaat
gagacggtagccactgactgggacaggacacattcctggaagtcccggaagcaaggacac
atccacagcaatgccaagaacacagaagcactgccaccaccaacttctctggacactgtg
ccttcaagggacgagctctga
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