Phodopus roborovskii (desert hamster): 127223600
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Entry
127223600 CDS
T08852
Symbol
Copa
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127223600 (Copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127223600 (Copa)
Membrane trafficking [BR:
prob04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127223600 (Copa)
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127223600 (Copa)
Exosomal proteins of bladder cancer cells
127223600 (Copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127223600
NCBI-ProteinID:
XP_051042254
UniProt:
A0AAU9ZCN1
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEAPEGLGEDALGKGQEEGGGWDVEEDLELPPE
LDVPTGVAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERK
KLPKESLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaaggccttagttttcatcccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgcactctcattgacaagtttgatgaacacgatggtccagtgcgaggcattgacttccat
aagcagcagccactgttcgtctctggaggagatgactataagattaaggtttggaattat
aaacttcggcgctgcctcttcacattgcttgggcacttagattatattcgtaccacattt
tttcatcatgaatacccttggattctgagtgcctcagatgaccagaccattcgagtatgg
aactggcagtctagaacctgtgtctgtgtgttaacaggacacaaccattatgtaatgtgt
gctcagttccacccttctgaagacctggtggtatcagctagcctggaccagactgtccgc
gtttgggatatttctggtctaaggaaaaaaaatctgtctcctggtgctgtggagtcggat
gtgagaggaataactggggttgacctatttgggactacagatgcagtggtgaagcatgta
cttgagggtcatgatcgtggagtaaactgggctgcctttcaccctactatgccccttatt
gtatctggggctgatgaccggcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgacacctgcaggggccattacaacaacgtgtcttgtgctgtcttccaccctcgc
caagagttgattctcagcaattctgaggacaagagtattcgagtctgggatatgtctaaa
cggactggggtccagactttccgccgggatcatgatcgtttctgggtcctagctgcccat
cccaacctcaacctgtttgcagcaggccatgatggtggaatgattgtatttaagctggaa
cgtgagcgtcccgcctatgctgttcatggcaatatgctgcattatgtaaaggaccgattc
ctacgtcagctggatttcaacagctccaaagatgtagctgtgatgcagttgaggagtggt
tccaagtttccagtattcaacatgtcatacaatccagcagaaaatgcagttctactgtgc
actagagcaagcaatttagagaatagtacctatgatctatacaccatccccaaagatgca
gactcccagaatcctgatgcccctgaagggaaacgatcctcgggcctaacagcagtttgg
gttgctcggaatcggtttgctgtcctagatcgcatgcattcgcttctgataaagaatctg
aagaatgagatcaccaaaaaaatccaggtgcccaactgtgatgaaatcttctacgctggc
actggcaacctcctgcttagggatgcagactccatcacactctttgatgtccagcaaaag
cggactctggcatcagtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tctcatgtagcactactggccaaacatgagcactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaagctggatgctctgtgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtgtttatctataccacaagcaaccacatcaaatat
gccgtcactacgggggaccatgggattatccgaactctggatttacccatctatgtcaca
agagtgaagggcaacaatgtatattgcctagacagggagtgccgccctcgagtactcacc
attgatcccacagagttcaaattcaagttggccctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaacgccaaactagtgggccagtcaatcattgcttatctccagaag
aagggttatcctgaagtggccctgcattttgtaaaggatgagaaaactcgcttcagccta
gctctggagtgtggaaacattgagattgctctagaagcagccaaagctctggatgacaag
aactgctgggagaagctgggagaagtggccctgttacagggtaatcaccagattgtagaa
atgtgctatcagcgaaccaaaaactttgacaaactttccttcttgtaccttattaccggc
aacctggagaaacttcgaaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgccttatacctgggtgatgtgtcagagagagtacgaatcctgaagaac
tgtggacagaaatccctggcctatctcacggctgctacacatggcttagatgaagaagct
gagagtctgaaggaaacatttgaccccgagaaggagacgatcccagacatagaccctaat
gccaagctgctccagccgcctgcacctatcatgccactggataccaattggcccttgctg
actgtgtccaaagggttctttgaaggctccattgccagcaaggggaagggaggagcactg
gctgctgacattgacattgacactgttggtactgaaggctggggagaggatgcagaactg
cagctagacgaagatgggtttgtggaggctccagaaggtttgggagaggatgctcttggc
aagggacaagaagaaggaggtggctgggatgtagaagaagatctggagctcccacctgag
ctggatgtacccactggggtggctggtggtgctgaagatgggttttttgtgcctccaacc
aagggaacaagcccaacacagatctggtgcaataactctcagcttccagttgatcacatc
ctggcaggttcttttgaaacagccatgcggcttcttcatgaccaggtgggagtaatccag
tttggcccctataagcaactgttcctacaaacatatgctcgaggccgcaccacctatcaa
gcactgccctgcttgccgtccatgtatagttaccctaatcgcaactggaaggatgcaggg
ctaaagaatggtgtaccagctgtgggcctaaagcttaatgacctgatccaacgattgcag
ctgtgctaccaactcaccacagttggaaagtttgaggaagctgtggaaaaattccgctcc
attttgctcagtgtgcctcttcttgttgtggacaataaacaggagattgcagaggcccag
cagctcatcaccatctgccgtgagtacattgtgggtttgtgcatggagatagaaagaaag
aagctgcctaaggagagcctagaccagcagaagcgcatctgtgagatggcagcctatttc
acacactccaacttgcagcctgtgcacatgatcttggtgctgcggacagccctcaacctt
ttcttcaagctcaagaatttcaaaacagctgccacctttgcccggcgcttgctagaactt
gggccaaagcctgaagtggcccaacagaccagaaaaatcctatctgcttgtgagaagaac
cccacagatgcctgccagctcaattatgacatgcacaacccctttgacatttgtgctgca
tcttaccggcccatctaccgtggaaaaccagtggagaagtgtccactcagtggggcctgc
tattcccctgagttcaaggggcaaatctgcagagtcactacagtgacagagattggcaaa
gatgtgattggtctgaggatcagtcctcttcagtttcgttaa
DBGET
integrated database retrieval system
