Phodopus roborovskii (desert hamster): 127223728
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Entry
127223728 CDS
T08852
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127223728 (Taf1a)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127223728 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
127223728
NCBI-ProteinID:
XP_051042454
UniProt:
A0AAU9ZC33
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSDFGEELTKLAEGEDGKRESSVLSNPGMHCPWLQERIETVVTGGKKKRDFAQTTSTCLS
FIQEALLKHQWRQAAEYMHSYLQTLEDSDTYRRQAAPEIIWKLGSEILFYHPKSNVETFN
NFADRMKNIGVLNYLKISLQHALYLIHHGMLEDANRILSDAETWRYGEKSSSQEVLINLV
QAYKGLLQYYTWSRKKMELSEIDKDDYAYTAKTRNMLSQSCRTSTNICALLKTPGVWDPF
VKSYVEMLEFYGDHDGAREILTNYAYDEKFPANPNAHIYLYEFLKREKAPRAKLISVLKI
LHEIVPSHPLMLEFHTLLRKSDTEEHRKLGLGVLFEVLDFAGCSKNITAWKYLAKYLKQT
LIESQPAWVEEVWKPRRSWWPAFHFSLFWAKSDWKADADLACEKAFVAGILLGKGCRYFR
YILKQDHEILKKKIKQMKKSVKKYSIVNPGVCT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttggtgaagaattgacaaagcttgccgagggagaggatggcaagagggaa
tcatccgtgttatctaatccaggaatgcattgcccatggcttcaggagcgcatagaaact
gtagtgactggagggaagaagaagagggactttgctcagacgacaagcacttgtttaagc
tttatccaagaagctctgctgaagcaccagtggcggcaagctgcagagtacatgcacagc
tacttacagaccctggaagactcagacacctacaggagacaggctgcccccgagatcatt
tggaagcttggaagcgaaattctattttatcatcccaaaagcaatgtggagacttttaat
aactttgctgaccggatgaaaaatattggtgtcctgaattatttaaagatttccttacaa
catgcattgtatcttatacatcatggaatgcttgaggatgcaaacagaattctcagtgat
gcagagacatggagatatggtgaaaagtcatcctcccaggaagtgttaatcaaccttgtt
caggcctacaaagggcttttacagtactatacttggtccagaaagaagatggaactgtca
gagattgataaggatgattatgcctacaccgcaaaaacccgaaacatgctcagccagagc
tgcaggacgtccacaaatatctgtgcactgctaaaaactcctggggtttgggatcctttt
gtgaagagttacgtggagatgctagaattctatggggatcatgatggagcccgagagata
ctcaccaattatgcgtatgatgaaaagtttcccgcaaaccccaatgcccacatctactta
tatgaatttctcaagagagagaaggcaccaagagcaaaactgataagtgttcttaagatt
ttgcatgagattgtgccatcccatccactaatgttagaattccatacattgcttagaaaa
tcagacacagaggaacaccggaagcttggcttgggtgtgttatttgaagtccttgatttt
gctggatgctctaagaacataactgcttggaaatacttggcaaagtatctgaagcagaca
ttaatagagagccagccagcatgggttgaagaagtgtggaaacctaggagaagctggtgg
ccggcctttcacttcagcctcttctgggcaaagagcgactggaaggcagacgctgacttg
gcttgtgagaaagcttttgtagctggaatccttttaggaaaaggttgtagatattttcgg
tatattttaaaacaagatcatgaaatcttgaagaagaaaattaagcagatgaagaagtct
gtgaaaaaatatagtattgtaaatccaggtgtttgcacctag
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