Phodopus roborovskii (desert hamster): 127223816
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Entry
127223816 CDS
T08852
Symbol
Med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127223816 (Med13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127223816 (Med13)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
127223816 (Med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
127223816
NCBI-ProteinID:
XP_051042512
UniProt:
A0AAU9YKR5
LinkDB
All DBs
Position
Unknown
AA seq
2170 aa
AA seq
DB search
MSSSFVSNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGKDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHVTLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCGLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGIHQVPASTRDPAMSSVTLTPPTSPEEVQAVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRLQNKRKYSATSSGLCEDESADKIACWDFVEATQ
RTSCSCLRHKSLKTRNTGQQGQAPSLGQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRV
SVSDTIGMDTDSASQRLVVSATDSQVRFSNIRTNDIAKTPQMHGTELVNSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPVEDRIDSLSQSFPPPFQEAVEPTVYV
GTAVNLEEDEANIAWKYYKVPKKKDVEFLPPQLPNDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDEIVQQYQIKNQYLSAIASDAEQEPKIDPYAFVEGDEEFIFTDKKDRQNSER
EAGKKHKVEDGTSTVTVLSHEEDPMSLFSSSKQDAPRPTNHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSASGSDDKASSKESKTGSLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSVDTAPGGTVLEGSSSSIGAQFRIEVEEGFCSPKPSEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSHCLPPIKLPEECIYRQSWTVGKLDLLPSGPSMPFIK
EGDGSNMDQDYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYESSDLYSPASTPSTCRPLNSVEPATVPSVPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRATSAENVNGGVKESEKVPDELILLLQDQCTNLFS
PFGAADQDPFPKMGIISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSCL
HPWAKQNDVSVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEAL
LNGAKSFFRDLTAIYESCRLGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADG
NNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPTNQSLLTAPQMTNTGNANT
PSVTLASAASSTMTMTSGVAISTSVATANSTLTTTSSSSSSNMSSGVSSNKLPSFPHLGS
MNTSGSGSMSAQASTVQSGQLGQQSSSLQAAGVSGESASLPTQPHPDVSESTMDRDKVGI
PTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSI
VSVQIVPCQYLLQPVKHDDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAM
ETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWIL
ASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGR
LGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFV
IMPDSVSTGSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLA
FNPNNDGADGMGIFDLLDTGDDLDPDIISILPASPTASPVHSPGSHYPHGGDAGKGQGTD
RLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHV
PSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVLN
QLYNFIMNML
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgtcgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggctgacttgacaggaattaagtggaaaagatacgtatggcaaggcccaacttct
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtaaagatcccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggcctttcctatgaatgtcgcactttgcttttc
aaagcagttcacaatctgttggagaggtgtttaatgaacagaaactttgtacgaattggc
aagtggtttgtaaagccatatgagaaagatgaaaaacctataaacaaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtctaccttctcagtgaagagcatgtcacccttgctcaacagtct
aatagcccatttcaagttatcttaagtccatttggactaaatggcactctcacaggacag
gcattcaagatgtctgattcagctaccaaaaaattaattggtgaatggaaacaattctac
cctatttcatgtggtttgaaggagatgtctgaagaaaagcaggaagatatggactgggaa
gatgattctttggctgcagtagaagttcttgttgcgggtgtccgaatgatctacccagca
tgctttgttctagtccctcaatcagacattcctactcctagctctgtgggatcctctcac
tgttcagcttcttgcttgggtatccatcaagtgcctgcttccacaagagatcctgctatg
tcttcagttactcttaccccacccacgtctcctgaggaagtccaagcagttgatcctcag
tctgcccagaagtgggtcaaattttcttcagtatctgatggcttcagcactgacagtact
agccatcatggtgggaaaatacccagaaaattagcaaatcacgtggtagatagagtctgg
caagaatgcaacatgaacagattacagaacaagaggaaatattctgctacatccagtggc
ctatgtgaagatgagtcagctgataaaatagcatgctgggactttgttgaagccacacaa
agaacaagctgtagttgtttgaggcataaaagtctcaaaacaagaaatactgggcaacaa
ggacaggcaccatctttagggcagcaacaacaagtacttcctaagcacaagaccaatgag
aagcaagaaaagagtgaaaagccgcagaaacgccccttgactccttttcaccatcgtgta
tctgttagtgataccattggcatggacacagactcagccagccaaagacttgtggtctct
gctacagatagtcaagtgagattctcaaacatccgaactaatgacatagcaaagacccct
cagatgcacgggactgaactggtgaattcacctcagcctcccccacttagtcctcatccg
tgtgatgtggttgatgaaggagtgactaaaacaccttcaactccccagagtcaacatttt
tatcaaatgccaacaccggatcccttggttcctaccaaaccagtggaagataggatagac
agtttgtcccagtctttcccacctccatttcaggaagctgtagaacctaccgtgtatgtg
ggtacagcagtaaacttggaagaagatgaagctaatatagcctggaagtattacaaagtc
ccaaagaaaaaagatgtagaatttttaccacctcaacttccaaatgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcag
tgtaagaaacctttaaaagtttctgatgaaatagtacagcaatatcaaattaaaaaccag
tatctttcagcaatagcatctgatgcagaacaagaacctaaaattgacccttatgcattt
gttgaaggagatgaggaattcatttttactgataaaaaagatagacaaaatagtgagaga
gaagctgggaagaaacacaaggtggaagatgggacatctactgttacagtgttatcacat
gaagaagatcctatgtcattatttagttcctctaagcaagatgctccacgtcctactaat
catgcccgtcctccatcaaccagtttgatttatgactcagatctggctgtctcttacact
gaccttgataacctcttcaattctgatgaagatgaattaacacctggatctaaaaaatca
gcaagtggatcagatgataaagccagctccaaagaatccaagacaggaagtctggatcca
ttgtcttgcataagtactgcagatcttcacaagatgtatcctacaccaccatcattggaa
caacacattatgggattttctccaatgaatatgaataataaagaatatggtagtgtggat
acagcacctggaggaactgtcctagaaggaagtagttctagtataggagcacagttcaga
attgaagttgaggagggattctgtagccctaaaccttctgaaattaaagatttttcttat
gtctataagcctgaaaattgtcaagttctagtaggatgttccatgtttgcacctttaaaa
actctaccaagccattgtctgcctcctatcaaattgccagaagagtgtatttaccggcag
agctggactgttggaaaattggacttgcttccttcaggcccttcaatgccattcatcaaa
gagggtgatggaagcaatatggatcaagattatggccctgcttacacacctcaaacccat
acttcttttgggatgcctccaagcagtgcacctcctagtaatagtggtgcgggaattctc
ccttctccatctacccctagatttccaactccaaggactccaaggactccaaggactcct
cgtggagctggtgggcctgctagtgctcaaggctcagtcaagtatgagagctcagacttg
tattccccagcctctactccatctacatgccgacccctcaattctgtcgagcctgcaact
gtcccttccgtcccagaagcacacagtctttatgtaaacctcatcctttcagagtcagtt
atgaatttgtttaaagactgtaattttgacagttgctgtatttgtgtttgcaacatgaat
atcaagggtgccgatgttggagtttacattccagatccaacgcaggaagcacagtatcgg
tgtacctgcggctttagtgctgtcatgaaccgaaaatttggaaataattcaggattgttt
cttgaagacgaacttgatatcataggacgtaacacagactgtggcaaagaagcagaaaaa
cgctttgaggctctcagggctacctctgcggaaaatgttaatggaggcgtaaaggaatct
gaaaaggtgcctgatgagttgatattactgctgcaagatcaatgcactaatttattttca
ccctttggagcagcagaccaagatcctttccccaaaatgggtataattagcaactgggta
cgtgttgaagaacgggactgttgcaatgactgctatcttgcattagaacatggacgtcag
ttcatggataatatgtcgggaggaaaggttgatgaagcacttgtcaaaagctcatgcttg
catccatgggccaaacaaaatgatgtgagtgtgcagtgttcccaggatatacttcgaatg
cttctctctcttcagccagttcttcaagatgctattcagaaaaaaagaacagtgaggcct
tggggggttcagggtcctcttacttggcaacaatttcataaaatggctggccgaggctct
tatggaactgacgaatctccagaaccactgccaattcccacgtttttgttgggttatgat
tatgattttctggtgctttctccatttgctctcccttactgggagaaacttatgctggaa
ccatatggatctcaaagagacatagcctatgttgtactctgtccagagaatgaagctttg
ttaaatggagccaaaagcttttttagagaccttactgcaatatatgagtcctgtcgattg
ggccaacacagacctatttctcgactgttgacggatgggatcatgaaagtgggagctaca
gcatcaaagaagctttcagaaaagtttgtaacagaatggttttctcaggcagctgatggt
aacaatgaagcattttctaagctcaaactttatgcacaagtctgcagatatgatttaggt
ccatatcttgcttctcaaccgttggacagctctctactctcccagccaaatttagttgcc
cctacaaatcaatctttgcttactgcacctcagatgacaaatactggaaacgctaatact
ccatctgtcaccttagcatctgcggcaagtagcactatgacaatgacttcaggtgttgcc
atatctacttcagttgccacagctaattcaactttgaccacaacttcatcttcatcatct
tccaatatgagtagtggagtgtcatcaaataaactgccttcatttccacaccttggcagt
atgaacactagtggttcaggatccatgtctgcacaagcaagtacagttcagagtggccag
ctaggacagcagtcatcatctctgcaggcagcaggagtgtcaggggagtcggcttcgctc
cccactcagccacatcctgatgtgtcagaaagcacaatggatcgtgataaagtgggaatt
cccacagatggtgattcacatgcaattacatacccacctgcaattgttgtttatataatt
gatccttttacatatgaaaataaagatgagagcaccaactcttccaatgtatggactttg
ggactacttcgttgcttcctggaaatggtccagactctccctcctcatatcaagagtatt
gtttctgtacagattgttccttgtcagtacctgttacaacccgtgaaacatgatgacaga
caaatctacacccagcatttaaaatctttggctttttcggcctttactcagtgtcggaga
cctcttccaacatcaaccaatgtaaaaacgctgactgggtttggtccgggcttagctatg
gaaactgctcttaaaagtcctgatagaccagagtgtattcgactttatacaccacctttt
attctggcccctgtgaaggacaaacaaacagagctaggagagacatttggagaagctggg
cagaaatacaatgttctctttgtgggctattgtttatcacacgatcaaaggtggattctt
gcatcttgcacagatctgtatggagagcttctagaaacatgtattatcaacatcgatgtt
ccaaatagggctcgtcggaaaaagggttctgccagaagatttggtctacagaaactttgg
gagtggtgcttaggacttgttcaaatgagttccttaccatggagagttgtaattggtcgc
ctgggtaggattggacatggagaattgaaagattggagttgtttgctgagtcgtcgaaat
ttgcagtctcttagcaaaaggctcaaagacatgtgtaggatgtgtggcatatctgctgca
gactctccgagcatccttagtgcttgtttggttgcaatggaaccccaaggttcttttgtt
attatgccagattctgtgtcaactggttctgtttttggaagaagcaccactctaaatatg
cagacgcctcagctaaataccccacaagatacgtcatgcactcatatacttgtgttccct
acttctgcttctgtgcaagtagcttcagctacttacaccactgaaaatttggatttagct
ttcaatcctaacaatgatggagcagatggaatgggtatctttgatttattagacacagga
gatgatcttgatcctgatatcattagtatccttcctgcatctccaactgcatctcctgta
cattctccaggttctcattacccccatggaggtgatgctggcaagggtcagggtactgat
cggctactttcaacagaatctcatgatgaagtaactaatattcttcaacaaccattggcc
cttggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtcagca
tgtcctcaagcacaatatcaatgtcccctttttcttaaggcctctttgcacctccacgtg
ccttcagtgcaatctgacgaactgcttcacagtaaacactcccacccacttgactcaaat
cagacttcagatgtcctcaggtttgttttggaacagtacaatgcactctcgtggctaacc
tgtgatcctgcaatccaggacagacgctcgtgtctcccaattcattttgtggtgctgaat
cagttatataactttatcatgaatatgctgtaa
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