Phodopus roborovskii (desert hamster): 127224039
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Entry
127224039 CDS
T08852
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prob03009
]
127224039 (Ddx21)
03036 Chromosome and associated proteins [BR:
prob03036
]
127224039 (Ddx21)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127224039 (Ddx21)
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
Pre-60S particles
Helicases
127224039 (Ddx21)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127224039 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127224039
NCBI-ProteinID:
XP_051042754
UniProt:
A0AAU9ZAP6
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MPGKLRSESRLGSVVAEEGMETLPSEKKTRKERTKSKTEEAAKGMEETVSSKAKSVKKKG
HFEDDVGPPKSKKTKKQEEAPQEDIASKSKTSKKKKEPLEKKVAPAKTKEIKIEELSEED
ADVPKSKKTKKEKEANGDVGEKSPKLKNGFSHSESNSTAKEATGEESSSEAEKEIPVEQK
EGAFSNFPISEETVKLLRARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPL
IEKLQAGLQDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQIER
IRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKD
SEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWSERA
AVIGDVIRVYSGHQGRTIIFCETKREAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFR
NGSFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHK
EEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDTVPPTAIGHFKQSAEKLIEE
KGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMHNISYAWKELKEQLGEG
IDAKVRGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLSVATEQPELEGPLEGYRGG
RGQRDGSRGAFRGQRGGSRNFRGQGQRGGNRNFRGGNKGQKRSFSKAFGQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgtagtgagtctaggttgggatcagtcgtggccgaggaaggcatg
gagacgttgccaagcgagaagaaaactagaaaagagaggacaaaatctaagactgaagaa
gcagcaaaaggaatggaagaaactgtttcctccaaagctaaatcggttaaaaagaaaggg
cattttgaagatgatgtgggtccccccaagtctaagaagaccaaaaagcaagaggaggca
cctcaagaagacattgcttctaaaagcaaaacctccaagaagaaaaaggagccccttgag
aagaaagtggcccctgctaaaaccaaagaaataaaaattgaggagctttctgaggaagat
gcagatgttcctaagtccaagaagacgaagaaagagaaggaagcaaatggagatgttgga
gagaaaagccccaagctcaagaatggattctctcattctgagtcgaattccactgccaaa
gaagctactggtgaagaaagtagtagtgaggcagagaaggaaataccggtggaacagaaa
gaaggagctttctctaactttcccatatctgaagagactgtcaagcttctcagagctcgt
ggagtaaacttcctgtttcctatacaagccaagacattccaccatgtgtacagtgggaaa
gacttaattgcccaggcacggacaggaactgggaaaacattctcctttgccatccctctg
attgagaagcttcaggctgggctacaagacaggaagagaggccgtgccccccaggtacta
gttcttgcacctacaagagaattagcaaatcaagtgagcaaagactttagtgacatcaca
aaaaagctgtcagtggcttgtttttatggtggaacaccctatggtggtcaaattgagcgc
atacggagtgggattgatatcctggttgggaccccaggtcgtattaaagaccacctgcag
aatggcaagctagatctcaccaaacttaaacatgttgtcctggatgaagttgaccagatg
ttggatatgggttttgctgatcaagtggaagaaattttatgtgtggcatacaagaaagat
tctgaagacaacccccaaacattgcttttctctgcaacttgccctcattgggtgtttaat
gttgctaagaaatacatgaaatctacatacgaacaggtggacctgattggtaaaaagact
cagaaagcagccataactgtggagcacttggcgattaagtgtcactggagtgagagggca
gcggtgattggggatgtaatcagagtgtacagtggccatcaagggcgcactatcatcttt
tgtgaaaccaagagagaagcccaggaactgtcacagaatacatgcataaaacaggatgcc
cagtcgttacatggcgacattccgcagaagcaaagggaaatcaccctgaaaggtttccga
aatggcagtttcggagttttggttgcaaccaatgttgctgcgcgtgggttagatatccct
gaggttgacttggttgttcaaagctgtccaccaaaggatgtggagtcctacattcaccgt
tcggggcggaccggcagagctggaaggacaggggtttgcatctgcttttatcagcacaag
gaagaataccagttagcgcaagtggagcagaaagcgggaattaaatttaaacggataggt
gttccatctgcaacagaaattataaaagcctccagcaaagacgccatcaggcttttggat
actgtgcctcctactgccattggtcatttcaagcaatctgctgagaagctaattgaggag
aagggagctgtagaggcactggcagccgcactcgcccacatttcgggggccacatcagtc
gaccagcgctccttgatcaactcacaagcgggctttgtgaccatgattctgcggtgctcg
attgaaatgcacaacattagttatgcttggaaagaacttaaggagcagctgggcgaaggc
attgatgcgaaagtgaggggaatggtcttcctcaaaggaaaattgggagtgtgttttgat
gtccgaactgaagcagtcacagaaatacaggaaaagtggcatgattcaagacgctggcag
ctctctgtagccacggagcagccggagctggaaggacccctagaaggctatcgaggcggc
aggggtcagcgggatggcagccgcggtgccttcagaggacagcggggtggaagcaggaac
ttcaggggacaggggcagcgaggaggaaacagaaacttcagaggtggcaacaaaggccag
aagcggagttttagtaaagcatttggtcagtga
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