Phodopus roborovskii (desert hamster): 127224258
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Entry
127224258 CDS
T08852
Symbol
Tapbp
Name
(RefSeq) tapasin isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04612
Antigen processing and presentation
prob05163
Human cytomegalovirus infection
prob05168
Herpes simplex virus 1 infection
prob05169
Epstein-Barr virus infection
prob05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
127224258 (Tapbp)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127224258 (Tapbp)
05168 Herpes simplex virus 1 infection
127224258 (Tapbp)
05163 Human cytomegalovirus infection
127224258 (Tapbp)
05169 Epstein-Barr virus infection
127224258 (Tapbp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
Med5
Ig_3
Motif
Other DBs
NCBI-GeneID:
127224258
NCBI-ProteinID:
XP_051043173
UniProt:
A0AAU9ZCS7
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MNPLSLLIAVALGLVPGVSAGPEAIECWFVEDAGGGGLTKKPATLLLRQGPRGPPPRPDL
DPKLYLKVDDPAGMLLAAFRRYPSGAPVPYCEMSRFIPFPASAYWARHLNPQQSCPRALD
GDWLLVSVSSTVFSLSSLLRPQPEPQLEPASITMATVVLTVLTHSPAPRIQLGKDAVLDL
SFAYMPPTPEDALSPATGPPPFGLEWRRQHRGKGHLLLAATPGLVEKMPPAQEKAVAFAA
WDDNEPWGPWTGNGTLWLPAVKPFQEGVYLATVHLPYLQGQVSLQLTVHKSPKVSLTPAP
LVWAAPGEAPPELLCLVSHFYPAEGLEVEWELRGGPEGGSRKAEGEMWLSNVRHHSDGSV
SQAGHLQLPPVTAQQHGVRYACRVYHPCLRASGRSAEVTLEVAGLSGPLVEDGIGLFLSA
FLLLALIKALGWMAAYLTIPEDTKVTAASLDSKKSQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctctgtccctgctcatcgctgtggctttgggcttggtgcctggcgtctcggct
ggaccggaggcgattgagtgctggttcgtggaagatgcaggtgggggtggcctgaccaag
aaacctgccacattgctactgcgccagggacccaggggtccaccgccccggccagatctt
gaccccaagctgtacttgaaggtggatgacccagcgggaatgctcctggctgccttcagg
cggtacccctcaggcgcccctgtaccatactgcgagatgagccgcttcatcccgttccct
gcctcggcttattgggctagacatctgaacccgcagcagagctgcccgcgggccctggac
ggcgattggctgctggtcagcgtgtccagcaccgtcttcagcctctctagcctgctgcga
ccacagccagagcctcagctggagcccgcctccatcaccatggcaacagtggtgctgact
gtcctcacgcacagccctgcccctcggatccaactgggaaaagatgcagtgctggacctg
agctttgcctacatgccccccactccagaagatgctctgtctccagccacaggtccccct
ccctttgggctggagtggcggcgccaacacaggggcaagggtcatctgctgctggcagca
actcctggactggttgagaaaatgccaccagcccaagaaaaggctgtggcatttgctgct
tgggatgacaatgagccctggggcccatggactgggaatgggaccttatggctgccggct
gtgaaaccttttcaggagggtgtctacctggctactgtacacctgccttatctgcaagga
caggtctccctgcagctgactgtgcacaagtcccccaaagtgtctctgacaccagcaccc
cttgtgtgggctgccccaggagaggcacccccggaactgctctgccttgtgtcccacttt
taccctgcggagggcctggaggtggagtgggagctcaggggtggtccagaaggcggttct
agaaaggctgagggggagatgtggctctccaacgtccgtcaccattctgatggctctgtg
agtcaggccgggcacctgcagctgcccccagtcactgcccagcagcacggagtacgctat
gcctgtcgggtctaccacccctgcctgcgagcatcgggtcgcagtgctgaagtcaccctg
gaagtggcaggcctctccgggcctttggtggaggatggcatcggcctgttcctgtccgcc
ttcctccttctggcactcatcaaggcactaggttggatggctgcctacctgaccattcct
gaagacacgaaggtaacagctgccagcctggattcaaagaagtcacagtaa
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