Phodopus roborovskii (desert hamster): 127224282
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Entry
127224282 CDS
T08852
Symbol
Tap2
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob02010
ABC transporters
prob04145
Phagosome
prob04612
Antigen processing and presentation
prob05163
Human cytomegalovirus infection
prob05168
Herpes simplex virus 1 infection
prob05169
Epstein-Barr virus infection
prob05170
Human immunodeficiency virus 1 infection
prob05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127224282 (Tap2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127224282 (Tap2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
127224282 (Tap2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127224282 (Tap2)
05168 Herpes simplex virus 1 infection
127224282 (Tap2)
05163 Human cytomegalovirus infection
127224282 (Tap2)
05169 Epstein-Barr virus infection
127224282 (Tap2)
09163 Immune disease
05340 Primary immunodeficiency
127224282 (Tap2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127224282 (Tap2)
Enzymes [BR:
prob01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
127224282 (Tap2)
Transporters [BR:
prob02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
127224282 (Tap2)
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_29
AAA_21
AAA_23
AAA_16
AAA_15
AAA_25
AAA_33
AAA_18
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-GeneID:
127224282
NCBI-ProteinID:
XP_051043208
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MALAHLRPWASLLLVDMALLTLLQGSLGNMLPQGLPGLWLEGTLRLGGLWGLLTVGGLLG
LMGTFLPLLCLATPLFFSLRALVGGTMSGPAVRVASASWGWLLAGYGASGLSWAVWAVLS
PPGAQEKEPGQENNKGLMWRLLKLSRPDLPFLLVALFFLVLAVLGETLIPHYSGRVIDIL
GSDFDPDAFASAIFFMCLFSVGSSLSAGCRGGSFLFTMSRINLRIRELLFSSLLRQDLGF
FQETKTGELNSRLSSDTSLMSRWLPFNANILLRSLVKVIGLYYFMLRVSPRLTFLSLLDL
PLTIAAEKVYNPRHQAVLTEIQDAVAKAGQVVREAVGGLQTVRSFGAEEQEVSRYKEALE
QCRQLWWRRDLERALYLAIRRVMALGMQVLILNCGVQQILAGEVTRGGLLSFLLYQEEVG
HYVRNLVCMYGDMLSNVGAAEKVFCYIDRKPNLPQPGTLAPSRLEGRVEFKDVSFSYPSR
PEKPVLKGLTFTLHPGKMTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGQPLVQYDHH
YLHRQVVLVGQEPVLFSGSVKDNIAYGLRDCEDAQVLAAAREACADDFIGEMTNGIHTEI
GEKGDQLAVGQKQRLAIARALVRNPRVLILDEATSALDTQCEQALQAWRSKGDRTVLVIA
HRLHTVRNADQVLVLKQGQLVEHDRLREDQDVYAHLVQQQLEG
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcactagcccacctgaggccctgggcatctttgctgctggtggacatggctttactt
acactgctgcaggggtctctgggaaatatgcttccccaggggcttccaggactgtggctg
gagggcaccctgcgacttggagggctatgggggctgctaacagtaggagggctgctggga
cttatggggacctttctgcccttgctctgcctggctaccccgctgtttttctcactgaga
gccctcgtgggaggcaccatgagtggcccggcagtcagagtggcttctgcctcttggggc
tggctgctggctggctatggggcttccgggctgagctgggctgtgtgggctgtgctgagc
cctccaggagcccaggagaaggaaccaggccaggagaacaacaaaggcttgatgtggcgg
ttgctgaagctttccaggcccgacctgcctttccttttggttgctttgttcttcctcgtg
ttggctgtgctgggggagaccttaattcctcactattctggtcgtgtgattgacatcctg
ggaagcgattttgacccagatgcttttgccagcgccatctttttcatgtgcctattctct
gttgggagctccctgtctgcaggctgccgaggaggttctttcctcttcaccatgtccagg
atcaacctgcggatacgagagctgcttttctcctccttgctgcgccaagaccttgggttt
ttccaggagaccaagacaggggagctgaactcacggctgagctcagacacctccctgatg
agtcgctggctccctttcaatgccaacatcctgttgcgaagcctggtgaaggtgattgga
ctctactacttcatgctgcgggtgtctcccagactcaccttcctgtcgctgctggacctg
cccctcacaatagcagctgagaaggtgtacaacccccgccatcaggcagtgttaacagag
atccaggatgcggtggctaaggctgggcaggtggtccgagaggcggtaggagggctgcag
actgtgcgcagctttggggctgaggagcaggaggtcagccgctataaggaggccctggag
caatgtcgacagctatggtggcgccgagacctggaaagagccttgtatttagccatacgg
agggtgatggccttgggcatgcaggtgctaatcctaaactgtggtgtacagcagatcctg
gctggtgaggtcaccaggggaggcctgctctccttcctgctctatcaggaggaagtgggg
cattatgtccggaacctggtgtgcatgtatggagatatgctgagcaatgtgggtgccgct
gaaaaggttttctgctacatagacagaaagccaaatctgccccagcctgggactctggcc
ccttccaggctggagggccgcgtagaattcaaagacgtctccttttcatacccaagtcgc
ccggagaagcctgtactcaagggcctgacgttcacgttgcatcctggaaagatgacagcg
ctggtaggacccaatgggtcagggaagagcaccgtcgctgctctgctgcagaatctgtac
cagcccaccgggggccagctgctgctggatgggcagcccctggtccagtatgatcaccac
tacctgcaccgccaggtggttctggtgggacaggagcctgtgctcttctccgggtctgtc
aaggacaacattgcctacggcctgagggactgtgaggatgcccaagtgctggcagctgcc
cgggaagcctgtgcggacgacttcataggggaaatgactaatgggatacacacagagata
ggggagaaaggggaccagttagctgtgggacagaaacaacgtctggcaattgcccgggcc
cttgtgcggaacccacgggtcctcatcctggatgaggctaccagtgccctggacacccag
tgtgagcaggctctgcaggcctggagatcgaagggggacaggacggtgctggtgattgcc
cacaggctgcacacagttcggaacgccgaccaggtgctggtgctcaaacaggggcagttg
gtggagcatgaccggctcagggaggatcaggatgtctatgctcacctggtacagcagcag
ctggaagggtga
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integrated database retrieval system
