Phodopus roborovskii (desert hamster): 127224360
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Entry
127224360 CDS
T08852
Symbol
Vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127224360 (Vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prob01007
]
127224360 (Vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127224360 (Vars2)
Enzymes [BR:
prob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
127224360 (Vars2)
Amino acid related enzymes [BR:
prob01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127224360 (Vars2)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127224360 (Vars2)
Prokaryotic type
127224360 (Vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
127224360
NCBI-ProteinID:
XP_051043333
UniProt:
A0AAU9ZD78
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MPHLPLASFRPPLWVLRPARGPPKPQSLCTQPELQSSPLTRRNREAKQKRLREKQAALEA
GLAETSKSPAVPTKAWSHKEVVLYETPTEPGEKKDVSGSLPPAYSPRYVEAAWYQWWVRE
GFFKPEYQARLSHATGETFSMCIPPPNVTGSLHIGHALTVAIEDALVRWHRMRGDRVLWI
PGSDHAGIATQAVVEKQLWKEQGVRRHQLSREDFLKAVWQWKHEKGGEIYEQLCALGASL
DWDRECFTMDAGSSAAVTEAFVRLYNSGLLYRSSQLVNWSCTLRSAISDIEVESRPLPGR
TVLQLPSCPTPVSFGLLVSVAFPVDGEPGAEIVVGTTRPETLPGDVAVAVHPDDTRYTHL
HGRQLRHPLTEQLLPLITDTAVEPHVGTGAVKVTPAHSPADAEMGARHGLTPLSVIAEDG
TMTALCGDWLQGLHRFLAREKIMCTLRERGLFRGLQEHPMVLPICSRSGDVVEYLLKSQW
FVRCQEMGDQAAKAVESGALELWPPFHRKTWQHWFTHIGDWCVSRQLWWGHQIPAYLVVG
EKAEGDRKECWVVGRSEAEARAVAAKLTGRPAAELTLERDPDVLDTWFSSALFPFSALGW
PQETPDLAHFYPLSLLETGSDLLMFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKM
SKSLGNVLDPRDIISGQELQVLQAKLKDGNLDLGELAIAAAAQKKDFPYGIPECGTDALR
FALCSHGILGGDLHLSVSEVLNYRHFCNKLWNALRFILRALGENFVPQPAEKVSPSSPMD
AWILSRLAFAAQECERGFLSRELSLVTHTLYHFWLHNLCDVYLEAVKPVLAKEPCPPGPP
QVLFSCADVGLRLLAPVMPFLAEELWQRLPPRQGGALVPSICVAPYPSAHSLESWRQPEL
ERCFSRVQEVVQALRALRATYQITKARPQVLLQSSDPEDQDLLQPFLEPLGTLSHCRAVG
FLPPGAAAPSGWALAPLDNTIKIYMELQGLVDPQSQLPRLAARRQKLQKQLDGLLNQTAS
EGAAERQQRLSALRLELSKLDQAASHLQQLLEEAPSTREL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacttacctctggcctctttccggccgccgctttgggtgctgaggcccgcccgg
gggccccccaagccccagtcactttgtacacagccagagctccaaagctcgcccctcact
cggaggaaccgtgaagccaaacagaagcgcctgcgggagaagcaggcggccctggaggct
gggctagctgagacgagcaagtcacctgcagtgcccactaaggcctggagtcacaaggaa
gtagtgttgtatgaaacccccaccgagccaggtgaaaagaaagatgtttctgggtccctg
cctcctgcttacagcccccgatatgttgaggcggcctggtaccagtggtgggtgcgagag
ggcttcttcaagccagagtatcaggcacggctgtcccatgctacgggggagaccttctcc
atgtgtatcccacctcccaatgtcactggctccctgcacatcggccatgcactgacagtg
gcgatagaggatgcacttgtgcgctggcaccggatgcgtggggatcgcgtgctgtggatc
cctggctcagatcacgcaggaattgctacacaggctgtggtggagaagcagctgtggaag
gagcagggagtgaggagacaccaactgagccgggaagacttccttaaggccgtgtggcag
tggaaacatgagaaaggaggggagatctatgaacagctgtgcgctctgggtgcctcttta
gactgggatcgagagtgtttcaccatggatgctggctcctcagcagctgtcacagaagct
tttgtgcgactttacaattcggggttgctgtaccggagcagtcagcttgtcaactggtca
tgtactttgagatcagccatctcagacattgaggtggagagccggcccctgcctggccgc
acggtgctccagctgcccagctgcccaacccctgtgtcttttgggctccttgtttctgtt
gccttccctgtagatggtgagcctggtgcggagatcgtggtgggaaccaccaggcccgag
acgctgcccggagatgtggctgtggccgtccacccagacgacacacgatacacacattta
catggacggcagcttcgtcaccctttgacggagcagcttctccccctcatcacagacacc
gccgttgagccacatgtgggcacaggagcagtgaaggtgactccagctcacagtccagca
gatgccgagatgggggcccggcatggcttgaccccactaagtgtcattgcagaggatgga
accatgacggccctctgcggagactggctgcagggtcttcaccgatttttggcccgggaa
aagattatgtgcacactgagggaacgaggcctgtttcgtggcctgcaggagcaccctatg
gtgctccccatctgcagccgctctggggatgtggtggagtacctgctgaagagccagtgg
tttgtccgctgccaggaaatgggggaccaagctgccaaggctgtggagtcaggggctctg
gagctctggccccccttccatcggaagacatggcagcactggtttacccacattggggac
tggtgtgtctcccggcagctgtggtggggccatcagattccggcctacctggtggttgga
gagaaggcagagggtgacaggaaggaatgctgggtggttggacgatcagaggctgaggcc
cgagcagtagcagcaaaactgaccgggagaccagcagcagagctgaccctggagagggac
cctgatgtcctggacacttggttctcttcggctcttttccctttttctgccctgggttgg
ccccaagagacgccagacctcgctcatttctaccccctttcacttctggaaaccggtagt
gacctcctgatgttctgggtgggccgcatggttatgctggggacccagctcacagggcag
ctccccttcagcaaggtgcttctgcatcccatggttcgggacaggcagggccggaagatg
agcaagtccctggggaatgtgctagaccctcgggatatcatcagtgggcaggagctgcag
gtgctccaggccaagctgaaagatggcaacttagacctgggagagctagccattgcagcc
gcagcacagaaaaaggacttcccttacggaatccccgagtgtgggacagatgccctgaga
tttgcactgtgctcccatggaatcctggggggcgacctgcacctgtctgtctctgaggtc
ctgaactaccgccatttctgcaacaagctctggaatgccctgcgctttattctccgtgcc
ctgggggagaactttgtaccccagccagcagagaaggtgtctccctcctcccccatggat
gcctggattctgagccgcttggccttcgcagcccaggagtgtgagaggggcttcctcagc
cgggagctttcgctagtcacccacaccctgtatcatttctggctccacaacctctgcgat
gtctacctggaagcggtgaagccagtgttggcaaaggaaccctgccccccaggaccccct
caggtcctgttctcctgtgctgatgttggtctgcgcctcctcgccccagtgatgcccttc
ctggcagaagaactttggcaaaggctgccccccaggcaaggtggcgcccttgtccccagc
atctgtgtggctccttaccccagtgcccacagcctggagtcctggcgccagcctgagctg
gagcgctgtttctccagagtccaagaggttgtacaggcactacgcgccctccgagccaca
taccagatcacaaaagcccgaccccaagtgctgctccagagctcagacccagaagaccag
gacctactccagcccttcctggagcccctgggcaccctgagccactgtagggctgtaggg
tttctgcccccaggggcagcagctccctcaggctgggccctggccccactggataacacc
attaagatctacatggagctgcagggcctggtggacccccagagccagctacctcggcta
gctgcccgaaggcagaagttacaaaaacagcttgatggcctcttgaaccagactgcatca
gagggggctgcagagagacagcagaggctttccgccctccgcctggaactctcaaagctg
gaccaggcagcctcccacctccagcaactgctagaagaggctcccagcaccagggaactc
tga
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