KEGG   Phodopus roborovskii (desert hamster): 127224367
Entry
127224367         CDS       T08852                                 
Symbol
Tubb
Name
(RefSeq) tubulin beta chain
  KO
K07375  tubulin beta
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04145  Phagosome
prob04517  IgSF CAM signaling
prob04540  Gap junction
prob04814  Motor proteins
prob05010  Alzheimer disease
prob05012  Parkinson disease
prob05014  Amyotrophic lateral sclerosis
prob05016  Huntington disease
prob05020  Prion disease
prob05022  Pathways of neurodegeneration - multiple diseases
prob05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    127224367 (Tubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127224367 (Tubb)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    127224367 (Tubb)
  09142 Cell motility
   04814 Motor proteins
    127224367 (Tubb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127224367 (Tubb)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127224367 (Tubb)
   05012 Parkinson disease
    127224367 (Tubb)
   05014 Amyotrophic lateral sclerosis
    127224367 (Tubb)
   05016 Huntington disease
    127224367 (Tubb)
   05020 Prion disease
    127224367 (Tubb)
   05022 Pathways of neurodegeneration - multiple diseases
    127224367 (Tubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prob03036]
    127224367 (Tubb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:prob04812]
    127224367 (Tubb)
   04147 Exosome [BR:prob04147]
    127224367 (Tubb)
Chromosome and associated proteins [BR:prob03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     127224367 (Tubb)
Cytoskeleton proteins [BR:prob04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    127224367 (Tubb)
Exosome [BR:prob04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127224367 (Tubb)
  Exosomal proteins of colorectal cancer cells
   127224367 (Tubb)
  Exosomal proteins of bladder cancer cells
   127224367 (Tubb)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 127224367
NCBI-ProteinID: XP_051043347
LinkDB
Position
Unknown
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEEDFGEEAEEEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaggccggacaatgtggcaaccagatcggtgctaagttt
tgggaggtgattagcgatgaacatggcatcgaccccaccggtacctaccatggagacagc
gacctgcagctggaccgaatttctgtgtactacaatgaagccacaggtggcaagtatgtc
cctcgagctatcttggtggatctagaacccggaaccatggactccgttcgatcaggtccc
tttggccagatcttcagaccagacaactttgtttttggtcagtctggggcaggcaacaac
tgggccaagggtcactacacagagggtgcagagctggttgactctgtcctggatgtggtg
cggaaggaagcagagagctgtgactgcctgcaaggctttcagctgacccactcactgggc
ggaggtaccggttctggtatgggcaccctgctcatcagcaaaatccgagaagaatatcct
gaccgaatcatgaataccttcagtgtggtaccttcacccaaagtgtctgacaccgtggtt
gagccctacaatgccaccctgtctgtccatcagttggtcgagaacacagatgagacctac
tgcattgacaacgaggccctctatgacatctgctttcgtaccctcaagctcaccacgccc
acctatggagacctaaaccaccttgtctctgccaccatgagcggtgtcaccacctgcctc
cgcttcccaggccagctcaatgctgatctccgaaagttggctgtcaacatggtgcccttc
ccacggctccacttcttcatgcctggcttcgccccactcaccagccgtggaagccagcag
tatcgggccctcactgtgcctgaacttacccagcaggtctttgatgccaagaatatgatg
gctgcctgtgacccccgccatggccgatacctcactgtggcagctgtcttccgtgggcgg
atgtccatgaaggaggtggatgagcagatgctgaatgtgcagaacaagaacagcagctac
tttgtggaatggatccccaacaacgtcaagacagccgtctgtgacatcccaccacgtggc
ctcaagatggccgtcaccttcattggaaacagcacagccatccaggagctcttcaagcgt
atctcagagcagttcacggccatgttccgccggaaggccttcctccactggtacacaggt
gagggcatggacgagatggagttcactgaagccgagagcaacatgaatgacctcgtctcc
gagtatcagcagtaccaggatgccacagcggaagaagaggaggatttcggggaggaggca
gaagaagaggcctaa

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