Phodopus roborovskii (desert hamster): 127224507
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Entry
127224507 CDS
T08852
Symbol
Aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127224507 (Aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127224507 (Aptx)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
127224507 (Aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
127224507 (Aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
127224507 (Aptx)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127224507 (Aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127224507 (Aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
Glycoamylase
Motif
Other DBs
NCBI-GeneID:
127224507
NCBI-ProteinID:
XP_051043495
UniProt:
A0AAU9ZC69
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MKRVCWLVRQDCQHQRIKLPHLEAVVIGRSPETKITDKKCSRQQVQLKAECNKGYVRVKQ
VGVNPTSIDSVIIGKDHEMKLQPGQVLHMVNELYPYIVEFEEVAKSPDLETQRKRKRSDC
DGEEEDTAQEAESGAELAPGSSPSQCSVPPKKGKDGVTKEGSLGHWIQGLKISMKDPKMQ
VYKDDLVVVIKDKYPKARYHWLVLPWASISSLKAVTSEHLELLKHMHTVGEKVIADFAGS
SKLSFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFMESQAVIKMVQEVG
GVTVKDGTSELLKLPLRCHKCQQLLPSIPQLKEHLRKH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtgtgctggttggtgagacaggactgccagcatcagcgaatcaaacttccc
catttggaagcagttgtgattggtcgaagcccagagaccaagatcacagataagaaatgt
tcccgacaacaagtacagttgaaagcagagtgtaacaaaggctatgtcagagtaaagcag
gtgggggtcaatcccaccagcattgactcagtcatcattgggaaggaccacgagatgaag
ctgcagcctggccaggttctccacatggtgaatgaactttatccatacattgtagagttt
gaggaagtagcaaagagtcctgacctagaaacacaaaggaagagaaagaggtcagactgt
gatggtgaggaggaggatactgctcaggaggctgagtctggggcagagctagcccctggg
agcagtcccagccagtgctctgtgcctcctaagaagggcaaggatggagtcaccaaagag
ggatcactgggccactggattcaaggcttgaagatttctatgaaagaccccaaaatgcag
gtttacaaagatgatctggtagtggtgattaaggataaatatcccaaggcccgttaccat
tggctggtcttaccatgggcctccatttccagtctgaaggctgtgaccagtgaacacctt
gaacttctcaaacatatgcacactgtaggggaaaaggtgattgcagatttcgctggatcc
agcaaactgagcttccggttgggttaccatgccattcccagcatgagccatgtacacctt
catgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacactggaattct
ttcaatacagaatactttatggaatcacaagctgtgatcaagatggttcaggaagttggc
ggagtgactgttaaagatgggacttctgaactcttgaagctgcctctccgttgccacaag
tgtcagcagctgctgccttccatcccgcagctgaaagagcacctcaggaagcactga
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