KEGG   Phodopus roborovskii (desert hamster): 127224507
Entry
127224507         CDS       T08852                                 
Symbol
Aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127224507 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prob03400]
    127224507 (Aptx)
Enzymes [BR:prob01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     127224507 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     127224507 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     127224507 (Aptx)
DNA repair and recombination proteins [BR:prob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127224507 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     127224507 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Glycoamylase
Other DBs
NCBI-GeneID: 127224507
NCBI-ProteinID: XP_051043495
UniProt: A0AAU9ZC69
LinkDB
Position
Unknown
AA seq 338 aa
MKRVCWLVRQDCQHQRIKLPHLEAVVIGRSPETKITDKKCSRQQVQLKAECNKGYVRVKQ
VGVNPTSIDSVIIGKDHEMKLQPGQVLHMVNELYPYIVEFEEVAKSPDLETQRKRKRSDC
DGEEEDTAQEAESGAELAPGSSPSQCSVPPKKGKDGVTKEGSLGHWIQGLKISMKDPKMQ
VYKDDLVVVIKDKYPKARYHWLVLPWASISSLKAVTSEHLELLKHMHTVGEKVIADFAGS
SKLSFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFMESQAVIKMVQEVG
GVTVKDGTSELLKLPLRCHKCQQLLPSIPQLKEHLRKH
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaagcgggtgtgctggttggtgagacaggactgccagcatcagcgaatcaaacttccc
catttggaagcagttgtgattggtcgaagcccagagaccaagatcacagataagaaatgt
tcccgacaacaagtacagttgaaagcagagtgtaacaaaggctatgtcagagtaaagcag
gtgggggtcaatcccaccagcattgactcagtcatcattgggaaggaccacgagatgaag
ctgcagcctggccaggttctccacatggtgaatgaactttatccatacattgtagagttt
gaggaagtagcaaagagtcctgacctagaaacacaaaggaagagaaagaggtcagactgt
gatggtgaggaggaggatactgctcaggaggctgagtctggggcagagctagcccctggg
agcagtcccagccagtgctctgtgcctcctaagaagggcaaggatggagtcaccaaagag
ggatcactgggccactggattcaaggcttgaagatttctatgaaagaccccaaaatgcag
gtttacaaagatgatctggtagtggtgattaaggataaatatcccaaggcccgttaccat
tggctggtcttaccatgggcctccatttccagtctgaaggctgtgaccagtgaacacctt
gaacttctcaaacatatgcacactgtaggggaaaaggtgattgcagatttcgctggatcc
agcaaactgagcttccggttgggttaccatgccattcccagcatgagccatgtacacctt
catgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacactggaattct
ttcaatacagaatactttatggaatcacaagctgtgatcaagatggttcaggaagttggc
ggagtgactgttaaagatgggacttctgaactcttgaagctgcctctccgttgccacaag
tgtcagcagctgctgccttccatcccgcagctgaaagagcacctcaggaagcactga

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