Phodopus roborovskii (desert hamster): 127224510
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Entry
127224510 CDS
T08852
Symbol
Cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04142
Lysosome
prob04144
Endocytosis
prob04721
Synaptic vesicle cycle
prob04961
Endocrine and other factor-regulated calcium reabsorption
prob05016
Huntington disease
prob05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127224510 (Cltc)
04142 Lysosome
127224510 (Cltc)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
127224510 (Cltc)
09156 Nervous system
04721 Synaptic vesicle cycle
127224510 (Cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127224510 (Cltc)
09164 Neurodegenerative disease
05016 Huntington disease
127224510 (Cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127224510 (Cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127224510 (Cltc)
Membrane trafficking [BR:
prob04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127224510 (Cltc)
Exosome [BR:
prob04147
]
Exosomal proteins
Proteins found in most exosomes
127224510 (Cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
127224510
NCBI-ProteinID:
XP_051043534
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccctgactatggagtcagacaaattcatttgcatt
agagaaaaagtaggagaacaggcccaggtggtaatcattgatatgaatgatcccagtaat
ccaatccgaagaccaatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gcgctgaaagctgcaaaaactcttcaaatatttaacattgaaatgaaaagtaaaatgaag
gcccacaccatgactgatgatgtcaccttctggaaatggatctccttgaatacggttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgtcattctagccttgcaggatgccagattatcaattaccgtacagatgca
aagcagaagtggttgcttctgacgggcatatctgcacagcaaaatcgtgtggttggagct
atgcagctctactctgtagataggaaggtgtctcagcctattgaaggacatgcagctagc
tttgcacaatttaagatggaaggaaatgccgaagaatcaacgttattttgttttgctgta
cggggtcaggcaggagggaagttgcatatcattgaagttggtacaccacccacagggaac
caacccttcccaaagaaggccgtggatgttttctttcccccagaagcacaaaatgacttt
cctgttgcaatgcagataagtgaaaagcatgatgtggtgttcttgattaccaagtatggt
tatatccacctctatgatcttgagactggcacatgcatctacatgaacagaatcagtgga
gaaactatcttcgttactgcgcctcatgaagccaccgctggaataataggagtcaacaga
aagggacaagttctgtcagtttgtgtggaagaagaaaacataattccttacatcaccaat
gtcctgcaaaatcctgatttggctctgagaatggcagtacgcaacaacttagctggtgct
gaagaactctttgcccggaaatttaacgctcttttcgcccaaggaaactactcagaggct
gcaaaggtggctgctaatgcaccaaagggaatccttcgtactccagataccatccgtcga
tttcagagtgtcccagctcagccaggtcaaacttcacctctacttcagtactttggaatc
cttttggaccagggccagctgaacaaatatgaatccttagagttgtgtagacctgtactt
cagcaagggcggaaacagcttttggagaaatggttgaaagaagataagctggaatgttct
gaagaactgggtgatcttgtaaagtctgtggacccgacgttggcacttagcgtgtacctc
agggccaatgtcccgaataaagtcatccagtgctttgcagagacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatacactccagactggatctttctcctgagaaac
gtaatgcgcattagtccagatcaaggacagcagtttgctcaaatgctagttcaggatgaa
gagcctcttgctgatatcacacagattgtagatgtctttatggaatacaatctaatacag
caatgtactgccttcttacttgacgctttgaagaacaatcgcccctctgaaggtccttta
cagacacgattgcttgagatgaaccttatgcacgcacctcaggttgcagatgctattcta
gggaatcagatgttcacccactatgatcgggctcatattgcccagctgtgtgaaaaggcg
ggcctactgcagcgtgcattagaacacttcaccgatttgtatgatataaagcgtgcagtt
gttcacacccatcttcttaaccctgagtggttagtgaattactttggctctttatcagtt
gaagactcccttgaatgtctcagagccatgctgtctgccaatattcgtcaaaatctacag
atctgtgttcaagtggcttctaaatatcacgaacaactatcaactcagtctctgattgaa
ctctttgaatcattcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcggcttgcaagactgggcag
atcaaagaagtggaaagaatctgcagagaaagcaactgctatgatcctgagcgagttaag
aattttctcaaggaggcaaaactaacagatcagttgccacttatcatcgtctgtgatcga
tttgactttgtccatgacctggtgctgtatttatatagaaacaaccttcagaagtatata
gaaatatatgtccagaaggtaaatccaagtcgactcccagtggttattggagggttgctt
gatgttgattgctcagaagatgttattaaaaatttgattcttgttgtgagaggtcaattc
tctactgatgagcttgtggctgaagttgaaaaaagaaacagattgaagctgcttctacct
tggcttgaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatatacatcgacagtaataacaacccagagagatttcttcgtgaaaacccctattat
gacagtcgtgttgttggaaagtattgcgagaagagagacccgcatctggcttgtgtcgct
tacgaacgtggccaatgtgacctggaactcatcaatgtttgcaatgagaattccctgttc
aaaagtctttcccgctacctggtccgccgaaaagatccagaattgtggggtagtgtgctg
ctggaaagcaatccatacagaagaccactaattgatcaggttgtacagacagccttgtct
gaaactcaggacccagaagaagtgtcagtaactgtgaaggcttttatgacagcagatctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaattaaggctgaccgaacacgtgtt
atggagtatattaaccgcctggataattatgatgctccagatattgccaatattgccatc
agcaatgagctgtttgaagaagcatttgctattttccggaagtttgatgtcaatacttca
gcagttcaggtcttaattgaacatattggaaacctggatcgcgcatatgagtttgctgaa
cgctgcaatgagcctgctgtttggagtcaacttgcaaaagctcagttgcagaaaggaatg
gtgaaggaggccattgattcttacatcaaagcagatgatccttcatcctatatggaagtt
gttcaggctgccaatactagtggaaactgggaagaactggtgaagtatttgcagatggcc
cgaaagaaggctcgagaatcctatgtggaaacagaattgatatttgccctggctaaaaca
aatcgccttgcagaattagaagagttcatcaatgggccaaacaatgctcatattcagcaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagctgttgtacaataat
gtttctaacttcggacgcttggcatctacccttgttcaccttggtgaatatcaggcagca
gttgatggtgctagaaaagctaatagtactcgaacatggaaggaggtctgctttgcctgt
gtagatgggaaagagttccgtcttgctcagatgtgtggacttcatattgtagtgcatgca
gatgaattagaggaacttatcaactactatcaggatcgtggatattttgaagaactcatc
accatgttggaggcagccttgggactagagagagctcacatgggaatgttcaccgaacta
gctattttgtattctaaattcaagccacagaaaatgagggaacacctggagttgttctgg
tcaagagtgaatattcctaaggttctgagagctgcagaacaagcccacctttgggcagag
ctggtgttcctgtatgacaagtatgaagagtatgataatgccataattaccatgatgaac
catcccactgatgcatggaaggaagggcagttcaaagacatcatcaccaaggtggccaat
gtggaactgtactacagagcaatccagttttacttagaattcaagcctctgttgttgaat
gacttgctcatggtgctgtctccacggttggatcacactcgagcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttacgctcagttcagaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcacttgctcaacgtttggaa
aaacatgaactcattgaattcagaagaattgctgcttatctctttaaaggcaacaatcgc
tggaaacagagtgtagagctgtgcaagaaagacagcctttacaaggatgcgatgcagtat
gcctctgaatctaaagatacagaattggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctttttacctgttatgatcttttaaggccagat
gttgtcctggaaacggcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatatttgacgaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagagtcattgagaaaagaagaagaacaagctacagagactcagcccattgtt
tatggtcagccccagctgatgctaacagcaggacccagtgtggctgtccctccccaggca
cctttcggctatggttacactgcaccaccatatgggcaaccacagcctggctttgggtac
agcatgtga
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integrated database retrieval system
