Phodopus roborovskii (desert hamster): 127224633
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Entry
127224633 CDS
T08852
Symbol
Ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
prob03040
Spliceosome
prob05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127224633 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
127224633 (Ncbp1)
03015 mRNA surveillance pathway
127224633 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127224633 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127224633 (Ncbp1)
03041 Spliceosome [BR:
prob03041
]
127224633 (Ncbp1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
127224633 (Ncbp1)
Spliceosome [BR:
prob03041
]
Common components
Common spliceosomal components
Cap binding complex
127224633 (Ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
AAA_11
Motif
Other DBs
NCBI-GeneID:
127224633
NCBI-ProteinID:
XP_051043691
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSYENDGGQPHKRRKTSDANKTEDHLESLICKLGEKSACSLESNLEGLAGVLEAD
LPNYKSMILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFSNTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSFWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDSMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQDDDNDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESNEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDEDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggcggcacagctacgagaacgatggtggacaacctcacaaaaggaggaag
acctctgatgcaaataaaactgaagatcatttggaatctttaatatgcaaactaggggaa
aagagtgcctgctctctggaaagcaatctagaaggcttggctggtgttttggaagctgac
cttcctaactacaagagcatgatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggactgctgaatgccagaaattacaacttc
ggtggagaatttgtagaagctatgattcgtcaacttaaggaatcactaaaagcaaataac
tataatgaagctgtgtatttggtccgttttctatctgatcttgtgaattgtcatgtgatt
gctgccccatctatggttgctatgtttgagaattttgtaagtgtgactcaggaagaagat
gtgcctcaagtgcgacgggattggtatgtgtatgcttttctatcatctttgccctgggtt
ggaaaagagttatatgagaagaaagatgcagaaatggacagaatcttctccaacactgaa
agttatcttaaacgacgccagaaaactcacgtgcccatgttacaagtatggactgccgat
aaaccacatccacaggaagagtatttagattgcttgtgggcccagattcagaagttgaaa
aaggaccggtggcaggaaaggcacatcctcagaccctaccttgcctttgacagcatcctc
tgtgaagcactgcagcacaacctgccccctttcacaccaccgcctcacacggaggactcg
gtataccccatgcccagagtaatcttcaggatgtttgactacacagatgacccagagggt
cctgttatgccagggagtcactcagtggagaggtttgtcatagaggagaaccttcactgc
atcataaaatccttctggaaggaacggaaaacttgtgctgcacagctggtgagctaccca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccccctcacattgatgtaatgtacactacactgctcatcgaactgtgc
aaacttcagccaggctctctgccccaggttcttgcacaggcgactgagatgctgtatatg
cgtctggactccatgagtacgacatgtgtagacaggtttattaattggttttctcatcat
ctaagtaactttcagttccgttggagctgggaagattggtcagattgtcttactcaggat
cttgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgcatgaggttgtct
taccatcaacatatattagatattgttcctcccaccttctcagctctgtgtcctgctaac
cccacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattccgtg
gcactctgtttatcagttgcttttaaaagtaaggcaactaatgatgaaatcttcagcatt
ctgaaggacgtaccaaatcctaaccaggacgatgataatgatgaaggcttcagttttaat
ccattgaaaatagaggtctttgtgcagactctgctgcacctagctgccaaatccttcagt
cactccttcagtgcccttgcaaagtttcatgaagtcttcaaaactctagcagaaagtaat
gaggggaagctacatgtgctgagagtcatgtttgaagtttggaggaatcatccacagatg
attgctgtccttgttgataagatgattcgtacacagattgttgactgtgccgcagtggca
aactggatcttctcatcggagctgtctcgtgacttcactaggttgtttgtttgggaaatt
ttgcactctacaattcgtaagatgaacaaacatgttctgaagatccagaaagagctagaa
gaagctaaagagaaactggcaaggcaacacaaaagacgaagtgatgacgaggacagaagc
agtgacaggaaagatggggccctcgaggagcaaatagaacgacttcaggagaaagtggag
tctgctcagagtgaacagaagaaccttttccttgtcatcttccagcgtttcatcatgatc
ttgactgagcacttggtacgatgtgaaacagatgggaccagcatattgaccccatggtat
aagaactgcatagagaggctgcagcagatcttcctgcagcatcaccagataatccagcag
tacatggtgaccctggagaacctgctttttactgccgagttagaccctcacatcctggct
gtgtttcagcagttttgtgctctgcaggcctaa
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integrated database retrieval system
