Phodopus roborovskii (desert hamster): 127224673 Help Entry 127224673         CDS       T08852                                  Symbol Col15a1 Name (RefSeq) collagen alpha-1(XV) chain   KO K08135   collagen type XV alpha Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:prob00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     127224673 (Col15a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:prob00535]     127224673 (Col15a1) Proteoglycans [BR:prob00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    127224673 (Col15a1) BRITE hierarchy Motif Pfam:  Endostatin Collagen Collagen_trimer Laminin_G_3 Motif Other DBs NCBI-GeneID:  127224673 NCBI-ProteinID:  XP_051043730 LinkDB All DBs Position Unknown AA seq 1376 aa AA seqDB search MAPRRTAQSQRRRWLLSNISFALLSAVLQTRAATGSAAQDHLDLTELIGVPLPSSVSFVT GYGGFPAYSFGPGTNVGRPARTLIPPTFFRDFAIGVVVKPSGAQGGMLFAVTDAFQKVIY LGLRLSGVEDGHQRIILYYTEPGSQVSREAAAFSVPVMTNRWNRFAVTVQGEEVALLMDC EEHSHIIFQRSSLPLMFEPSAGVFVGNAGATGLERFTGSIQQLTIYTDPRTPEELCEAQE SSASGEASGLQEMDEVAEIMEAVTYTQAPPKEVHVAPISTPPTSSSPAEDTELSGEPVPE GSPETNLSIIGHGSPEQGSGEILNDTLEVNAVDADPSTEGGSGDGALLNVTDGQVLSATA TEEAPVPVTTTLEAEISSVPTESPALAVSTQSSREEATQDPESEENLATAASGDGEMPTS TAGNTEAGTMSTAEPTLSVLTQEPREEATLGPNGEEWLTPAVSKVPLGAFEEEEASGTVI DSLDVFTPTMVLEQASEAPTDIQNALTPTVVLEQASRSPTDTQTTLTPTVAPEQVFTATP ADAEDLVVSTEEDEKEGSDSTPPSGPPLPTPTVTPERQVTPVGVEAEGSGHVWGLDVGSG SGDIVTNEDLLRGPPGPPGPPGSPGIPGKPGTDVFMGPPGSPGEDGATGETGPPGPEGQP GLDGASGKPGMKGEKGARGPNGSVGEKGDPGNRGLPGTPGKNGQIGTPGVMGPPGPPGPP GPPGPGCTTELGFEDIEGSGDIQLLSKPRVSGPSSPSGPKGEKGEQGPKGERGMDGTSTV GPPGPRGPPGRVEVLSSSLINITNGSMNFSDIPELVGPPGPDGVPGLPGFPGPRGPKGDT GVPGFPGLKGEQGEKGEPGAILTGDIPLEMVKGRKGEPGMHGAPGPMGPKGPPGHKGEFG LPGRPGRPGLNGLKGAKGDRGIMMPGPPGLPGPPGPPGSPGAVVNIKGAVFPVPARPHCK TPVGTAHPGDPELVTFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPVDPAYLRHFLHSL KGENGDAASRGESSNNLFVSGPPGLPGHPGLVGQKGEAVVGPQGPPGIPGLPGPPGFGRP GVPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTALNDMGDMLQKAHLVI EGTFIYLRDSAEFFIRVRDGWKKLQLGELIPIPADSPPPPALSSNPYQPQPPLSPVLRAN YERPVLRLVALNTPVAGDVRADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFS LPIVNLKGQVLFNNWDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVIWHGSNPHGV RLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYSCANRLIVLCIENSFMTDARK NT seq 4131 nt NT seq  +upstreamnt  +downstreamnt atggcacccaggaggaccgcgcagagccagcgccggcggtggctgctctccaacatctcc ttcgcgctgctctccgctgtactgcagacgcgcgcagcaacagggtcagctgcccaggac catctggacctcacagagctcattggtgttccattaccctcatctgtgtcctttgtcact ggctatggtggtttcccagcttacagctttgggcctggtaccaatgttggtcgcccagcc aggaccctcatcccacctaccttcttcagggacttcgccattggtgtggtggtgaagccc agtggtgcccaaggaggtatgctcttcgctgttaccgacgctttccagaaagtcatctac ctgggcctgcggctttctggagtggaggatggccaccagcggattatcctgtactacacc gaaccaggctcccaagtgtcccgtgaagctgctgccttttcagtgcctgtgatgaccaac aggtggaatcgttttgctgtgaccgtccagggcgaggaagtggcccttctcatggactgt gaggaacacagccatatcattttccagcgatcttccctgcctctgatgttcgagcccagt gctggggtatttgtaggcaacgcaggagccacggggctggagagatttactggctccata cagcagctaactatctacactgaccccaggacccccgaggagctgtgtgaagcccaagag tcctcggcatctggagaagccagtgggcttcaggagatggatgaagtcgctgagatcatg gaagctgtcacctacactcaagccccacctaaagaagtacacgttgctcccataagcaca cctcctacttcatcctctcctgctgaagacacagagctttctggtgaacctgtgccagaa ggatccccagaaaccaacttgagcatcattgggcatggcagccctgagcaagggtctggt gagattctgaatgacacactagaggtcaatgctgtggatgcggaccccagtactgaaggt ggttcaggggatggggccttgttgaatgtcactgatggtcaggtgttatcagcaacagca actgaggaggccccggtacctgtcaccactaccctggaagcagagataagcagtgtgcct actgaaagccccgccctggccgtgtccacccaaagctccagggaagaggccacacaggac ccagaaagtgaagaaaacctagcaaccgcagcgtccggggatggcgagatgcccaccagc actgctgggaatacagaggctggtaccatgtctactgcagagccaaccctgtccgtgcta acccaggagccaagagaagaggccactctgggtccaaacggtgaagaatggctaacccca gctgtgtccaaagtgccccttggtgcttttgaggaagaagaagccagcgggactgtcatc gacagcctggatgtcttcacacccacaatggtccttgagcaagccagtgaggcccctaca gacattcagaatgcgctcacacccacagtggtccttgagcaagccagcaggagtcctaca gacacccagaccactctcacgcccacagtggctcccgagcaagtatttactgctacaccg gctgatgcagaagacctggtggtatccacagaggaagatgaaaaggaggggtctgacagt acaccccccagtggacctccgctccccacacccacagtgactcccgagagacaggtcact ccggtaggagtggaggctgagggctctggccatgtttggggcttggatgtgggatcaggc tctggagacattgtgaccaatgaggatctgttgagaggtcctccaggccctccagggccc cctgggtcacccgggattccaggaaaaccaggaactgatgttttcatgggaccccctggc tctcctggagaggacggagctactggtgagacaggacctccgggccccgagggacagcct ggacttgatggagcctctggcaagcctgggatgaaaggagagaagggagcaagaggacct aatggctctgtcggtgagaagggagaccctggcaaccgaggcttgccagggaccccaggg aaaaatggacaaattggcactcctggggtcatgggaccaccaggtcctcctggacctcct ggacccccaggccctggatgtacaacagaacttggatttgaggacatcgaaggctcaggg gacatccagctgctgagcaaacccagagtctcggggccctcttctccaagtggtcccaaa ggagaaaaaggagagcaaggacccaagggtgaacgggggatggacggaaccagcactgtg gggccccctgggcccaggggaccacctgggcgtgtcgaggtcctgtccagttctttgatc aacatcactaatggatccatgaatttctctgacattcctgagcttgtgggacctccgggg ccggatggtgtgcccgggctaccaggatttccaggccccagaggaccaaaaggtgacacc ggtgtgcctggattcccaggtctaaaaggagaacagggcgagaagggagagccgggtgcg atcctgacaggggacattcctctggaaatggtgaaggggagaaagggtgaacctggaatg catggagccccaggacccatgggacccaagggaccaccaggacataaaggagaatttggc ctccctggacgacctggtcgcccaggattgaatggtctcaagggtgccaaaggagatcga gggatcatgatgccaggtccacctggcctacctggacccccaggacccccaggatcccct ggagctgtggttaacatcaaaggtgctgttttcccagtacctgcccggccacactgcaaa acaccagttggtactgctcaccctggtgacccagagcttgtcactttccacggtgttaaa ggagagaaagggtcctggggtcttcctggttcaaaaggagagaagggggaccaaggagcc caaggaccaccaggccctccagttgatccagcttacctgagacactttctccacagcttg aagggggagaatggagatgcagcatccagaggagagtccagcaacaacctctttgtctct ggccccccaggcctaccagggcatccaggcctggttggacagaaaggagaggctgttgtg gggccccagggccccccaggaattccaggcctacctgggccacctggctttgggagacct ggtgtccctggaccaccaggaccccctgggccaccaggacctcctgccatcctgggtgca gctgtggctcttccaggcccacctggccctccaggacagccaggactcccgggatccaga aacttggtcacagcactcaatgacatgggtgacatgctgcagaaagctcacttggtcata gaagggacgtttatctacttaagggacagtgcagagttcttcattcgtgtccgagatggt tggaaaaaattacagctgggagaactgatccccatccctgctgacagccccccaccacca gcgctttccagcaatccataccagccacagcctccactgagccccgttttaagagccaat tatgagaggcctgttctgcgtctggttgctctgaacacaccagtggctggggatgtccga gctgatttccagtgcttccagcaggccagggctgcaggactgctgtccaccttccgagct ttcctatcgtcccacttgcaagacctctccacagttgtgaggaaagcagagagattcagc cttccaatcgtgaacctcaagggacaagtgctttttaacaattgggactcaatattttct ggtgatggaggtcagttcaatacccacattccgatatactcttttgatggtcgagatgtg atgactgatccttcttggccccagaaagtcatttggcatggatccaacccccatggtgtc cgtcttgtggacaagtactgtgaagcctggcgaaccacagacatggcagtaacaggattt gcctccccactgagcacagggaagattctggaccagaaagcttatagctgtgctaacagg ctaatcgtcctgtgtatcgaaaacagtttcatgacagacgctaggaagtaa

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