KEGG   Phodopus roborovskii (desert hamster): 127224711
Entry
127224711         CDS       T08852                                 
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1
  KO
K11373  elongator complex protein 1
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:prob03016]
    127224711 (Elp1)
Transfer RNA biogenesis [BR:prob03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    127224711 (Elp1)
SSDB
Motif
Pfam: Beta-prop_ELP1_1st A-sol_ELP1 HB_ELP1 Beta-prop_ELP1_2nd TPR_ELP1 TPR_GEMI5 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd COG2_C
Other DBs
NCBI-GeneID: 127224711
NCBI-ProteinID: XP_051043786
LinkDB
Position
Unknown
AA seq 1327 aa
MRNLKLLRTLEFRDIQAPGKPLCFSLRTERGTVLIGSERGLIEVDPEKKEVKNEIPLVAE
GFLPEDGSGCIVGIQGLLDQESVCVATASGDIILCNLSTHQLDCVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTKDFDVITEQQIHQEDFGEGKFVTVGWGSKETQFHGSEGRQAAF
PVQMHESALPWDDHKPQITWRGDGQFFAVSVVCPQTGARKIRVWNREFALHSTSEPVPGL
GPSLAWKPSGSLIASTQDKPNQQDVVFLEKNGLLHGQFTLPFFKDEVKVNDLLWNADSTV
LAVWLEDLPREDSPPLKSYVQLWTMGNYHWYLKQSLPFSTSGKNQIVSLLWDPVTPYRLH
VLCQGWRYLCCDWHWTTDRSSGNSASDLANVAVIDGSRVLVTVFRQTVIPPPMYTYRLQI
PHPVNQVVFSAHLEKSNDLAVLDASNQISVYKCGDELNIDSTVKLGAVGGNGFKVPLKTP
HLEKRYRIHFGNSEDEEVNPLQLSLLTWIEEDAFLAISHSHSSLQSVIHRLTVAPSEMDE
EQGQLNVSSSVTVDGVIIGLCYNSTTKSTVVQLADGQVLKCLWESPSLTVEPWKNSEGSP
VRFVHPCTQMEVAMIGEQESVLGLTDRCRFFINNTEVASNITSFAVCDEFLLLTTHSHTC
QCFSLRDATLKTLQAGLCDSNKANGEILRKVERGSRIVIVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIKQIDSVNHI
NLFFTELKEEDVTKTMYPPPVSKGVQMSRDPDRKKIDLICDAMRAAMENINPHKYCLAIL
TSHVKKTTPELEIVLQKVHQLQANAPSVAETVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNALKKMEPNYQRFTIDKYLKRYEKAIGHLSKCGPEHFAE
CLNLIKDKNLYKEALKLYQPGSPQYRVVSVAYGEHLMREHQYEPAGLIFAQCGAREKALA
AFLTCGSWQQALCVAAQLHLTKDKMACLGRTLAGKLVEQRKHSEAAIVLEQYAQDYEEAV
LQLLEGAAWEEALRLVYKYNRVDIIETSVKPSILEAQKNYMAFLDSQTATFIRHKNRLLV
VRELKNKAPQLHVDNEVAHGPETDFFSESGSELSGRYSHSNSRISARSSKNRRKAERKKH
SLKEGSPQEHLALLEALSEVIQSIDKLKDEVHAILKVLFLFKFEEQGKELQNAYENTLKL
MEKAVPEIWTLACQQSSITSVLGPSSTVNSITASYHQKQPPVPVVDAGICIPPKIDQRSL
WKLNLLE
NT seq 3984 nt   +upstreamnt  +downstreamnt
atgagaaatctgaagttgcttcggacactggaatttagggacattcaagcacctgggaaa
cctctttgtttctctctccgaactgaacgggggacagtgctaattggctcagaacgtggg
ctgattgaagtagatcctgagaaaaaagaagtgaagaatgaaattccgttggtggcagaa
ggctttcttccagaggatggaagtggctgcattgtgggaattcagggcctgctggatcag
gagtctgtgtgtgtggccaccgcctctggggatatcatactgtgtaatctcagcacacac
cagctggactgtgttgggagtgtggccagtggtatctctgtcatgagctggagccctgat
caagaactggtgcttcttgccacaggtcaacagaccctgattatgatgacaaaagacttt
gatgtaatcacggagcagcagatccaccaggaggattttggtgaaggcaagtttgtcact
gttggatggggcagtaaggagacacagttccatggctcagaaggcaggcaagcagccttt
ccagtgcaaatgcatgagtctgccctgccctgggatgaccacaaaccacaaattacttgg
cgtggggatgggcagttttttgctgtgagtgttgtttgcccacaaacaggggctcgcaag
atcagagtgtggaaccgagagtttgctttgcactcaaccagtgagcctgtgccaggactg
gggccctccctggcttggaaaccctcaggcagtttgattgcatctactcaagataaaccc
aaccagcaagatgttgtgtttcttgagaaaaatggacttcttcatggacagtttacactt
cctttcttcaaagatgaagttaaagtaaatgacttgctgtggaatgcagattccactgtg
cttgctgtgtggctagaagaccttccaagggaagatagtcctcctctgaaaagctatgtc
cagctctggaccatggggaactatcactggtatctcaaacaaagcctgcccttcagcacc
agtgggaagaaccagatcgtgtctctgctatgggacccagtgacaccgtaccggctacat
gttctctgtcagggctggcgttacctatgctgtgactggcactggaccactgaccggagc
tctggaaatagtgccagtgacttggcaaatgtggctgttattgatggaagcagggtgttg
gtgacagtcttccggcagactgtgatcccacctcccatgtatacctaccggctgcagatc
ccacatccagtgaatcaagttgtgttctctgctcaccttgaaaagagcaatgaccttgct
gtccttgatgccagtaaccagatttctgtctacaagtgtggtgatgagctaaacatagat
tccacggtgaaacttggagctgtgggtggaaatggatttaaagttccccttaaaacacct
catctggaaaagagatacagaattcactttgggaacagtgaagatgaggaggtaaaccca
ttgcagctgagccttctcacctggattgaagaagacgcttttctggccataagccacagt
cactccagcctgcagtctgtcattcatcgtttgactgtggccccttctgagatggatgaa
gagcaaggacagctgaatgtcagttcatctgtgacagtagatggggtcatcattggttta
tgttacaattccacgaccaagtcaacggtggtgcagctggctgatggtcaggtgctcaag
tgcctttgggaatcaccatctctgactgtggaaccatggaagaactctgaaggatctcct
gttcgatttgttcatccatgcacacagatggaagtggccatgattggagaacaggagagt
gtccttggtctgactgacaggtgtcgctttttcatcaataacactgaggttgcatcaaat
atcacatcatttgcagtgtgtgatgagtttttactgttgacaacccattcccatacctgc
cagtgtttttccctgagggatgctacacttaaaacgttacaggctggtttgtgcgacagc
aataaggccaatggagaaattctacgcaaagtggaaagaggttcacggattgtcatagtt
gttccccaggacacaaaacttatactacagatgccgaggggaaacttggaggttgttcat
catcgggccttggtcttggctcagattcggaagtggctggacaaacttatgtttaaggaa
gcatttgaatgcatgagaaaactgagaattaacctcaatctcattcacgatcataaccct
aaggtatttcttgaaaatgtggaaaccttcataaagcagatagattctgtaaatcatatt
aacttgtttttcacagaactaaaggaagaagatgtcacaaagactatgtaccctccacca
gtttccaagggtgtccagatgtccagggaccctgataggaagaaaattgaccttatatgt
gatgctatgagagcagccatggagaacatcaatcctcacaagtactgcctggcaatactc
acatctcatgtgaagaaaacgaccccggaactggaaattgtactgcagaaggtacaccaa
cttcaagcaaatgctccctctgttgctgagactgtgagtgcagaggaggccttgaagtac
ctgctgctcctggtagatgtcaatgaattatatgatcattctcttgggacctatgacttt
gatttagtcctcatggtagctgagaagtcacaaaaggaccctaaggaatatcttccattt
cttaatgcacttaagaaaatggagcctaattaccaacgtttcaccatagacaagtacttg
aaacgatatgaaaaggccattgggcacctcagcaagtgtggacctgagcattttgcagaa
tgcctaaatttgataaaagataaaaacttgtataaagaagctctgaagttgtatcagcca
ggttcaccacagtaccgggtggtcagtgttgcttatggggaacacctgatgcgggagcac
cagtatgagccagcggggctcatatttgcccagtgtggagcccgtgagaaggctctcgca
gcatttttgacttgcggcagctggcagcaagctctctgtgtggctgcccagcttcatctg
accaaagacaagatggcttgccttggtagaaccctggcaggaaagctggttgagcagagg
aaacacagtgaggcagccatagtcctggagcagtatgcccaggattatgaagaagctgta
ctccagctgctggaaggagctgcctgggaggaagctctgaggctggtatacaagtataat
agagtggatattatagaaaccagtgtgaaaccttccattttagaagcccaaaaaaattac
atggcctttctggactcacagacagccacattcattcgacataaaaaccgtttgctggtg
gttcgagagctcaagaacaaagcaccacagctgcatgttgataatgaggtggcccatggt
ccagagacagacttcttctcggagagtggcagtgagctgagtggcagatactcccacagt
aactccaggatatctgcgcggtcatctaaaaaccggcgcaaggcagaacgcaagaagcac
agcctcaaagaagggagtcctcaggagcatctggcccttttggaggcactgagtgaagtg
atacaaagcattgacaaattgaaagatgaagtacacgctatcttaaaggtgctctttctc
ttcaagtttgaagagcaagggaaggaattgcagaatgcctatgagaatactctgaagctg
atggagaaggcagttccagaaatctggacgcttgcctgccagcagagttcaatcacgtct
gtcctaggtccgagttccactgtgaatagcatcactgcctcttaccaccagaagcagcct
cctgtccccgttgttgatgctgggatttgtataccaccgaagattgatcagagaagcctg
tggaagctgaacctgctggagtga

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