Phodopus roborovskii (desert hamster): 127224711
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Entry
127224711 CDS
T08852
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127224711 (Elp1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
127224711 (Elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
COG2_C
Motif
Other DBs
NCBI-GeneID:
127224711
NCBI-ProteinID:
XP_051043786
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MRNLKLLRTLEFRDIQAPGKPLCFSLRTERGTVLIGSERGLIEVDPEKKEVKNEIPLVAE
GFLPEDGSGCIVGIQGLLDQESVCVATASGDIILCNLSTHQLDCVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTKDFDVITEQQIHQEDFGEGKFVTVGWGSKETQFHGSEGRQAAF
PVQMHESALPWDDHKPQITWRGDGQFFAVSVVCPQTGARKIRVWNREFALHSTSEPVPGL
GPSLAWKPSGSLIASTQDKPNQQDVVFLEKNGLLHGQFTLPFFKDEVKVNDLLWNADSTV
LAVWLEDLPREDSPPLKSYVQLWTMGNYHWYLKQSLPFSTSGKNQIVSLLWDPVTPYRLH
VLCQGWRYLCCDWHWTTDRSSGNSASDLANVAVIDGSRVLVTVFRQTVIPPPMYTYRLQI
PHPVNQVVFSAHLEKSNDLAVLDASNQISVYKCGDELNIDSTVKLGAVGGNGFKVPLKTP
HLEKRYRIHFGNSEDEEVNPLQLSLLTWIEEDAFLAISHSHSSLQSVIHRLTVAPSEMDE
EQGQLNVSSSVTVDGVIIGLCYNSTTKSTVVQLADGQVLKCLWESPSLTVEPWKNSEGSP
VRFVHPCTQMEVAMIGEQESVLGLTDRCRFFINNTEVASNITSFAVCDEFLLLTTHSHTC
QCFSLRDATLKTLQAGLCDSNKANGEILRKVERGSRIVIVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIKQIDSVNHI
NLFFTELKEEDVTKTMYPPPVSKGVQMSRDPDRKKIDLICDAMRAAMENINPHKYCLAIL
TSHVKKTTPELEIVLQKVHQLQANAPSVAETVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNALKKMEPNYQRFTIDKYLKRYEKAIGHLSKCGPEHFAE
CLNLIKDKNLYKEALKLYQPGSPQYRVVSVAYGEHLMREHQYEPAGLIFAQCGAREKALA
AFLTCGSWQQALCVAAQLHLTKDKMACLGRTLAGKLVEQRKHSEAAIVLEQYAQDYEEAV
LQLLEGAAWEEALRLVYKYNRVDIIETSVKPSILEAQKNYMAFLDSQTATFIRHKNRLLV
VRELKNKAPQLHVDNEVAHGPETDFFSESGSELSGRYSHSNSRISARSSKNRRKAERKKH
SLKEGSPQEHLALLEALSEVIQSIDKLKDEVHAILKVLFLFKFEEQGKELQNAYENTLKL
MEKAVPEIWTLACQQSSITSVLGPSSTVNSITASYHQKQPPVPVVDAGICIPPKIDQRSL
WKLNLLE
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctgaagttgcttcggacactggaatttagggacattcaagcacctgggaaa
cctctttgtttctctctccgaactgaacgggggacagtgctaattggctcagaacgtggg
ctgattgaagtagatcctgagaaaaaagaagtgaagaatgaaattccgttggtggcagaa
ggctttcttccagaggatggaagtggctgcattgtgggaattcagggcctgctggatcag
gagtctgtgtgtgtggccaccgcctctggggatatcatactgtgtaatctcagcacacac
cagctggactgtgttgggagtgtggccagtggtatctctgtcatgagctggagccctgat
caagaactggtgcttcttgccacaggtcaacagaccctgattatgatgacaaaagacttt
gatgtaatcacggagcagcagatccaccaggaggattttggtgaaggcaagtttgtcact
gttggatggggcagtaaggagacacagttccatggctcagaaggcaggcaagcagccttt
ccagtgcaaatgcatgagtctgccctgccctgggatgaccacaaaccacaaattacttgg
cgtggggatgggcagttttttgctgtgagtgttgtttgcccacaaacaggggctcgcaag
atcagagtgtggaaccgagagtttgctttgcactcaaccagtgagcctgtgccaggactg
gggccctccctggcttggaaaccctcaggcagtttgattgcatctactcaagataaaccc
aaccagcaagatgttgtgtttcttgagaaaaatggacttcttcatggacagtttacactt
cctttcttcaaagatgaagttaaagtaaatgacttgctgtggaatgcagattccactgtg
cttgctgtgtggctagaagaccttccaagggaagatagtcctcctctgaaaagctatgtc
cagctctggaccatggggaactatcactggtatctcaaacaaagcctgcccttcagcacc
agtgggaagaaccagatcgtgtctctgctatgggacccagtgacaccgtaccggctacat
gttctctgtcagggctggcgttacctatgctgtgactggcactggaccactgaccggagc
tctggaaatagtgccagtgacttggcaaatgtggctgttattgatggaagcagggtgttg
gtgacagtcttccggcagactgtgatcccacctcccatgtatacctaccggctgcagatc
ccacatccagtgaatcaagttgtgttctctgctcaccttgaaaagagcaatgaccttgct
gtccttgatgccagtaaccagatttctgtctacaagtgtggtgatgagctaaacatagat
tccacggtgaaacttggagctgtgggtggaaatggatttaaagttccccttaaaacacct
catctggaaaagagatacagaattcactttgggaacagtgaagatgaggaggtaaaccca
ttgcagctgagccttctcacctggattgaagaagacgcttttctggccataagccacagt
cactccagcctgcagtctgtcattcatcgtttgactgtggccccttctgagatggatgaa
gagcaaggacagctgaatgtcagttcatctgtgacagtagatggggtcatcattggttta
tgttacaattccacgaccaagtcaacggtggtgcagctggctgatggtcaggtgctcaag
tgcctttgggaatcaccatctctgactgtggaaccatggaagaactctgaaggatctcct
gttcgatttgttcatccatgcacacagatggaagtggccatgattggagaacaggagagt
gtccttggtctgactgacaggtgtcgctttttcatcaataacactgaggttgcatcaaat
atcacatcatttgcagtgtgtgatgagtttttactgttgacaacccattcccatacctgc
cagtgtttttccctgagggatgctacacttaaaacgttacaggctggtttgtgcgacagc
aataaggccaatggagaaattctacgcaaagtggaaagaggttcacggattgtcatagtt
gttccccaggacacaaaacttatactacagatgccgaggggaaacttggaggttgttcat
catcgggccttggtcttggctcagattcggaagtggctggacaaacttatgtttaaggaa
gcatttgaatgcatgagaaaactgagaattaacctcaatctcattcacgatcataaccct
aaggtatttcttgaaaatgtggaaaccttcataaagcagatagattctgtaaatcatatt
aacttgtttttcacagaactaaaggaagaagatgtcacaaagactatgtaccctccacca
gtttccaagggtgtccagatgtccagggaccctgataggaagaaaattgaccttatatgt
gatgctatgagagcagccatggagaacatcaatcctcacaagtactgcctggcaatactc
acatctcatgtgaagaaaacgaccccggaactggaaattgtactgcagaaggtacaccaa
cttcaagcaaatgctccctctgttgctgagactgtgagtgcagaggaggccttgaagtac
ctgctgctcctggtagatgtcaatgaattatatgatcattctcttgggacctatgacttt
gatttagtcctcatggtagctgagaagtcacaaaaggaccctaaggaatatcttccattt
cttaatgcacttaagaaaatggagcctaattaccaacgtttcaccatagacaagtacttg
aaacgatatgaaaaggccattgggcacctcagcaagtgtggacctgagcattttgcagaa
tgcctaaatttgataaaagataaaaacttgtataaagaagctctgaagttgtatcagcca
ggttcaccacagtaccgggtggtcagtgttgcttatggggaacacctgatgcgggagcac
cagtatgagccagcggggctcatatttgcccagtgtggagcccgtgagaaggctctcgca
gcatttttgacttgcggcagctggcagcaagctctctgtgtggctgcccagcttcatctg
accaaagacaagatggcttgccttggtagaaccctggcaggaaagctggttgagcagagg
aaacacagtgaggcagccatagtcctggagcagtatgcccaggattatgaagaagctgta
ctccagctgctggaaggagctgcctgggaggaagctctgaggctggtatacaagtataat
agagtggatattatagaaaccagtgtgaaaccttccattttagaagcccaaaaaaattac
atggcctttctggactcacagacagccacattcattcgacataaaaaccgtttgctggtg
gttcgagagctcaagaacaaagcaccacagctgcatgttgataatgaggtggcccatggt
ccagagacagacttcttctcggagagtggcagtgagctgagtggcagatactcccacagt
aactccaggatatctgcgcggtcatctaaaaaccggcgcaaggcagaacgcaagaagcac
agcctcaaagaagggagtcctcaggagcatctggcccttttggaggcactgagtgaagtg
atacaaagcattgacaaattgaaagatgaagtacacgctatcttaaaggtgctctttctc
ttcaagtttgaagagcaagggaaggaattgcagaatgcctatgagaatactctgaagctg
atggagaaggcagttccagaaatctggacgcttgcctgccagcagagttcaatcacgtct
gtcctaggtccgagttccactgtgaatagcatcactgcctcttaccaccagaagcagcct
cctgtccccgttgttgatgctgggatttgtataccaccgaagattgatcagagaagcctg
tggaagctgaacctgctggagtga
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