Phodopus roborovskii (desert hamster): 127224906
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Entry
127224906 CDS
T08852
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127224906 (Rbm39)
Spliceosome [BR:
prob03041
]
Common components
Common spliceosomal components
General mRNP proteins
127224906 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
127224906
NCBI-ProteinID:
XP_051044080
UniProt:
A0AAU9YR51
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagccatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagcgaaagaggagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaacggaagcgaagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagacgattccgaggccgctacaggagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccttttagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggaaagggatgcaaggacagttttctgcatgcaactt
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcctacgtggaa
tttgttgatgttagttcagtgcctctagcaattggattaactggccaacgtgttttagga
gtgccaattatagtacaggcatcacaggcagaaaaaaatagagctgctgcaatggcaaat
aatttacaaaagggaagtgctggacctatgaggctctacgtgggctctttacattttaac
ataactgaagatatgcttcgggggatctttgagccttttggaaggattgagagtattcag
ctcatgatggatagtgaaactggccggtcaaagggatacggattcattacattttctgac
tcagaatgtgccaaaaaagctttggaacagcttaatggatttgaactagctgggaggcca
atgaaagttggtcacgttactgaacgaactgatgcttctagtgctagttcatttttggac
agtgatgaactagaaagaactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacagcaggctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagaccgaagcctcagcgttagctgcagctgcatctgttcaacca
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgttattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatct
attgctgcagctattgctgccgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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