Phodopus roborovskii (desert hamster): 127224969
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Entry
127224969 CDS
T08852
Symbol
Atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04136
Autophagy - other
prob04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127224969 (Atg4c)
04136 Autophagy - other
127224969 (Atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127224969 (Atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127224969 (Atg4c)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127224969 (Atg4c)
Peptidases and inhibitors [BR:
prob01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
127224969 (Atg4c)
Membrane trafficking [BR:
prob04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
127224969 (Atg4c)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127224969 (Atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
127224969
NCBI-ProteinID:
XP_051044175
UniProt:
A0AAU9ZE82
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MEASGTDEVDKLKTKFMSAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKMLP
ARSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLL
AQGLILHFLGRGWTWPDALHIENSDSDSWTSNTVKKFTASFEASLSGERELRTSAVSLKE
TFRKYSNDHEMQNEIYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYNSDVIDKQTNSVTSGDARDKAVVILVPVRLGGE
RTNPDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERVSEEITKILKISSKEKYPLFTFVN
GHSRDFDFTSTAASEEDFFSEDEKKRFKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttcaggaacagatgaagttgacaaactaaaaactaaatttatgtctgcatgg
aacaacatgaaatacagttgggtgttgaaaacaaagacatattttagtagaaattcacct
gttttattacttggaaaatgttatcattttaaatatgaagatgaaaacaagatgttgcct
gcaagatcaggatgtaccattgaagatcatgtgattgcaggaaatgtggaagaattccgt
aaggatttcatttctagaatttggctgacctacagggaagaatttcctcaaatagaagct
tcagccttgactacagactgtggctggggatgtacactgaggactggccagatgctcttg
gctcaagggctcatactacattttcttggcagaggttggacctggcctgatgcactgcat
attgagaattcagactctgactcatggacctccaacaccgtcaaaaagtttactgcatca
tttgaagcatcactttcaggggaaagagaactcagaacttcagcagtttctctgaaggaa
acattcaggaagtattctaatgaccatgaaatgcagaatgagatttatcacaggaaaatc
atctcttggtttggagattcccctgtggctgtctttggcttacatcgactgatagagttt
gggaagaagtctgggaaaaaggctggagattggtatggaccagctgtggttgctcacatt
ttaagaaaagcagtagaagaagcaagacatcctgatttacaaggaataactatttatgtt
gcacaggactgtacagtttacaattctgatgtcattgataaacagactaattctgtgacc
tctggagatgccagggacaaggctgtcgttatcttagttcctgttagacttggtggagaa
agaaccaaccctgactatctggagtttgtgaagggtgttttaagccttgaatattgtgta
ggtattatcggtggcaaacctaaacagtcgtattactttgctggatttcaagatgacagt
ctgatttacatggatcctcattactgccagtcttttgtagatgtcagcataaaggacttc
cctcttgagacattccactgtccttctcctaaaaagatgtcattcaggaaaatggatcct
agttgtacgataggattttactgtcgaaacgtccaggacttcgaacgagtgtctgaagaa
atcactaagatactgaaaatttcctctaaggagaaatatccgttgtttacttttgtaaat
ggccattccagagactttgattttacgtctactgcagccagtgaagaagactttttctca
gaagatgaaaagaaaagattcaaacgatttagcacagaagagtttgtcctgctttaa
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