Phodopus roborovskii (desert hamster): 127225328
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Entry
127225328 CDS
T08852
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127225328 (Zc3h12a)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127225328 (Zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
Frey
Motif
Other DBs
NCBI-GeneID:
127225328
NCBI-ProteinID:
XP_051044702
UniProt:
A0AAU9ZE44
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSDPCGKKSVQEASPTMSLWDLEDSHSCRGRPQPAQDPEAKEASAELQMKVDFFRKLGYS
SSEIHSVLQKLGVQADTNTVLGELVKHGSATERECQASTDSCPQPPLVPRGGSTPKPSEP
SLPEEDKDGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWR
KEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVVVSN
DTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKSLPSEHRK
QPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSGQRPSPTSQ
PSSESPEAEQGSLDGKKLGARSSPGPHQEGSTQTFTAAGRSLPVSGGSFGPTEWLPHTLD
SLPYTSQECLDSGIGSLESQMSELWGVRGGSPGESGPPQGPYASYHTYRSELPTAPAYPP
FRQPMGAGHFSVPDYVPPLPTFPAREYLSEPYPLPSPTAVLQEPQRPSPGATRGHWGRVN
ERAKERAGVYTKLCGVFHPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLSE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccctgtggaaagaagtctgtccaagaagccagccccaccatgagtctgtgg
gatcttgaggacagccacagctgccggggtcgccctcagccagcccaggatcctgaagct
aaagaggcctctgctgagctgcagatgaaggtggactttttccggaaactgggctactcg
tcctctgagatccacagtgtcctgcagaagctgggggtccaagcggacaccaacacagta
ctgggggagctggtgaagcatggttctgctactgagagagagtgccaggcctcgacagat
tcctgcccccagccccctctggtgccccggggcgggagcacccccaagccttccgaaccc
tcactcccagaggaggacaaggacggcagtgacctgaggcctgtggtcattgatggaagc
aacgtggccatgagccacgggaacaaggaagtcttctcttgtcgaggcattctgctggct
gtgaactggtttctggagcgaggccacacagatatcactgtgtttgtaccatcttggagg
aaagaacagcctcggccagatgtgcccatcacagaccagcacattctgcgggaactagag
aaaaagaagatcctggtgttcacgccatccaggcgtgtaggtggcaagcgtgtggtgtgc
tatgatgaccgcttcattgtgaagctggcgtacgaatctgatggggtggtagtctccaat
gacacgtaccgggacctccaaggcgagagacaggagtggaagcgcttcattgaggagcgg
ctgctcatgtactctttcgtcaatgacaaattcatgccccctgatgaccctttgggacgg
catgggcctagcctggacaacttccttcgtaagaagtcactgccttctgaacacaggaag
cagccgtgtccctatgggaggaagtgtacctatggaatcaagtgccgattcttccaccct
gagcggccgagccgcccccagcgctctgtggctgatgaactccgtgctaatgccctcctc
tcaccccccaggaccccagtcaaggacaaaagtggccagaggccttcccctacctctcag
cctagctctgagtctccagaagctgagcaaggcagtctggatgggaaaaaactgggggct
agatcatccccaggccctcaccaagaaggctcaacacagacctttactgcagctgggaga
agcctccctgttagtgggggcagctttgggcccacagagtggctcccacacaccctagac
tcactcccatacacttcccaggagtgccttgattcaggcattggctccttggagagccag
atgtcagaattatggggggtgcgaggaggcagcccgggggagtcgggccctcctcagggc
ccttatgctagttatcatacctataggtctgaactcccgacagcacctgcctaccctccc
tttagacagcccatgggtgcgggccacttcagtgtccccgactacgtgcccccgctaccc
acctttccagccagagagtatttatctgagccataccctttgccctcacctaccgcagtc
ctgcaagagccacagaggcccagcccaggggctaccaggggccactggggtagggtgaac
gaaagggccaaagaaagggctggtgtgtacaccaagttgtgtggtgtctttcacccgcac
cttgtagaagctgtgatggggcgattcccacagctcctggacccccagcagctggccgct
gagatactttcttacaagtcccagcacctcagtgagtaa
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