KEGG   Phodopus roborovskii (desert hamster): 127225404
Entry
127225404         CDS       T08852                                 
Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03082  ATP-dependent chromatin remodeling
prob03083  Polycomb repressive complex
prob04110  Cell cycle
prob04213  Longevity regulating pathway - multiple species
prob04330  Notch signaling pathway
prob04350  TGF-beta signaling pathway
prob04613  Neutrophil extracellular trap formation
prob04919  Thyroid hormone signaling pathway
prob05016  Huntington disease
prob05031  Amphetamine addiction
prob05034  Alcoholism
prob05165  Human papillomavirus infection
prob05169  Epstein-Barr virus infection
prob05200  Pathways in cancer
prob05202  Transcriptional misregulation in cancer
prob05203  Viral carcinogenesis
prob05206  MicroRNAs in cancer
prob05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127225404 (Hdac1)
   03083 Polycomb repressive complex
    127225404 (Hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    127225404 (Hdac1)
   04350 TGF-beta signaling pathway
    127225404 (Hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127225404 (Hdac1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    127225404 (Hdac1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    127225404 (Hdac1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    127225404 (Hdac1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127225404 (Hdac1)
   05202 Transcriptional misregulation in cancer
    127225404 (Hdac1)
   05206 MicroRNAs in cancer
    127225404 (Hdac1)
   05203 Viral carcinogenesis
    127225404 (Hdac1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    127225404 (Hdac1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    127225404 (Hdac1)
   05165 Human papillomavirus infection
    127225404 (Hdac1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    127225404 (Hdac1)
  09165 Substance dependence
   05031 Amphetamine addiction
    127225404 (Hdac1)
   05034 Alcoholism
    127225404 (Hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prob03036]
    127225404 (Hdac1)
Enzymes [BR:prob01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127225404 (Hdac1)
Chromosome and associated proteins [BR:prob03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127225404 (Hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     127225404 (Hdac1)
    BRAF-HDAC complex
     127225404 (Hdac1)
    REST complex
     127225404 (Hdac1)
    SHIP complex
     127225404 (Hdac1)
    MiDAC complex
     127225404 (Hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127225404 (Hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127225404 (Hdac1)
  Chromatin remodeling factors
   NuRD complex
    127225404 (Hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127225404
NCBI-ProteinID: XP_051044842
UniProt: A0AAU9ZE97
LinkDB
Position
Unknown
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagagaaaagtctgttactactacgacggtgatgttgga
aactactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcataat
ttgctgctcaactatggtctttaccgaaaaatggaaatctatcgtcctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaatttttgcgttccattcgc
ccagataacatgtctgagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtatttgatggcttgtttgagttctgtcagctgtctactggtggctctgtggcaagt
gctgtgaaacttaataagcaacagaccgacatcgctgtgaactgggctgggggtctgcat
catgcgaagaagtccgaagcatccggtttctgttacgtcaacgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagagtgctgtatattgacattgatattcaccatggc
gatggtgtggaagaggccttctataccacagaccgggtcatgactgtgtccttccataaa
tatggagagtacttcccaggaactggggacctacgggatattggagctggcaaaggcaag
tactatgctgttaactaccctctccgagatgggattgatgacgagtcctatgaagccatt
ttcaagccagtcatgtccaaagtaatggagatgttccagcctagtgcagtagtcttacaa
tgtggctcagattctctgtctggagaccggttaggttgcttcaatctgaccatcaaaggg
catgccaagtgtgtggagtttgtcaagagtttcaacttgcctatgctgatgctgggagga
ggtggatataccatccgtaatgttgctcggtgctggacttatgagacagctgtggccctg
gacacagagatccctaatgagctaccgtacaatgactactttgaatattttggaccggac
ttcaagcttcatatcagcccttccaatatgaccaaccagaacactaacgaatacttggag
aaaatcaagcagaggctctttgagaacttgaggatgctgccccatgcacctggtgtccaa
atgcaggcaatccctgaggatgccatcccagaggagagtggtgatgaggacgaagacgac
cctgacaaacgcatctccatctgctcttctgacaaacgaattgcctgtgaggaagaattc
tccgattcagatgaggagggagaaggtggtcgcaagaactcttctaatttcaaaaaagcc
aaaagagtcaaaacagaggatgaaaaagaaaaagatccagaagagaaaaaagaagtcacc
gaagaggagaagaccaaggaggagaagccagaagccaaaggggtcaaagaagaggtcaag
ctagcctga

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