Phodopus roborovskii (desert hamster): 127225788
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Entry
127225788 CDS
T08852
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127225788 (Ddx17)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127225788 (Ddx17)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127225788 (Ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127225788
NCBI-ProteinID:
XP_051045329
UniProt:
A0AAU9ZG70
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGSGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRASYANGS
GYGSPNSAFGAQAGQYTYAQGTYGAAAYGTSGYTAQEYAAGTYGASSTTSTGRSSQSSSQ
QFSGIGRSSQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggatcgggaccgagaccgtggagggtttggagca
agaggtggtagtggccttcccccgaagaagtttggtaatcccggggagcggttacgtaaa
aagaagtgggatttgagtgaactccccaaatttgagaagaatttttatgtggaacatcca
gaagtagcaagattgactccgtatgaggttgatgagctgcgacgaaagaaagagattaca
gtgagagggggagatgtttgtccaaaacctgtctttgccttccatcatgctaatttccca
cagtatgtaatggatgtgctgatggatcagcattttacagagccaactcccattcagtgc
cagggatttcctttggctcttagtggccgggatatggttggcattgcacagactgggtct
gggaagacattagcgtatttgctgcctgcgattgttcatataaaccaccagccatatttg
gaaagaggagatggtccaatttgtttagtgctggctcctactagagaacttgctcagcag
gtgcagcaggtagctgatgattatggaaagtgttctagattgaagagtacatgcatttat
ggaggtgctcctaaaggtccccagattcgagacttggagagaggtgttgagatttgcata
gccactcctgggcgcctaatagatttcctggagtcaggaaagacaaaccttcgccgatgt
acttaccttgtgttggatgaggctgaccgaatgcttgatatgggctttgagccccagatc
cgtaaaattgttgaccaaatcaggcctgaccggcagacactgatgtggagtgcaacctgg
ccaaaagaagtgcggcagcttgcagaggacttcctgcgagattacacacagatcaatgtg
ggcaatctggagttgagtgccaaccacaacatcctgcagattgtggatgtctgtatggaa
agtgaaaaggatcacaaattgatccaactgatggaagaaatcatggcagaaaaagaaaat
aagactataatatttgtggaaacaaagagacgctgtgatgacctcactcggagaatgcgc
agagatgggtggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgatctggaaaggctcctatcctcattgccacggatgtagcctcc
cgagggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctcc
gaggactatgttcaccgcatcggccgcacagcccggagcaccaacaagggcactgcttat
accttctttaccccagggaacctaaagcaggctagagagctgatcaaagtgttagaagag
gccaatcaggccatcaatccaaaattgatgcagctggtggaccacagaggtggtggcggc
ggagggggtaagggtggtcgctctcggtaccggactacttcttcagccaacaatcctaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggggtcaaggatggtggccggaga
gattctacaagctaccgggatcgtagtgaaaccgatagagccagttatgctaatggcagt
ggctatgggagcccgaattctgccttcggggcacaagcaggccaatacacctatgctcaa
ggcacctatggggcagctgcttatggcaccagtggctacacagcccaggagtatgctgct
ggtacttacggggctagcagcaccacctcaactgggaggagctcccagagctctagccag
cagtttagtgggataggccgatctagtcagcagccacagccactgatgtcacagcagttt
gcacagcctccaggagctaccaatatgataggctacatggggcaaactgcttaccagtac
cctcccccccctcctccccctcctccttctcgtaaatga
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