Phodopus roborovskii (desert hamster): 127225920
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Entry
127225920 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127225920
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127225920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
DHquinase_II
Motif
Other DBs
NCBI-GeneID:
127225920
NCBI-ProteinID:
XP_051045529
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MGNRLSPRDWQAERPPDLHIRAAGGPAKRRTGLTKGGVESYFFKGFTHFLFQEHCHSDEG
YFIIIVLCFGYVGILNGLLWFGKIVILGDNNLVLSMSGRKTVTGMMINGTFEEIVPSSNP
NSPTGIENVSSYPSKDHREDFTPIKCSPYYPGVKAEHQGLLIDEEMVFIXKAIDNHLPTV
DTLLSRLKLYLVKDPLLDFKEQLSGKDNFTECFSVQERLEPFVRDFHMVEETFCKKKLPS
VFPSEYEFLISTNPKQEIPILPSSKLKESMSEIMDYVDENEKLFKRDLSTKHEFDTDDMK
CNSTEILPIASPREPECNKPGELEISPTNLSLPRQYSSVSSLCAGFHTFPFSAVCKINLL
SAGESTNRYCMLWQLGSCRNSWVSFLLTVPRLQEPSGQYSLADMRSIFSIKGDSLVINPA
KAKRWRQARLNPIMAETLEHLKAYLCHNGLSSKETKLEIFLPTKVLQLESWLEHQSRPLP
IMPKSDKSTNVQRLRPQKRPSSEKQVPHLLLSDECVSVKNXKTEENPKNNQEVASKIMQN
TDNSRVGLDNSVPFVEPTSSSWIKASYDKKQNDLDLLSEFITLRSKDKPSTSDDEVTGHD
QNNEFQDKEKCSSTLQEESPIVSNNKTPEERFQERTDDVIEIQASDTQCQAYYLLEAAAT
PVLKKLACLCTYPAADWKFATVIFDQTRFFLKEQEKIINDAVHQGKTDDREITFRHAAFL
HLLVTIRDALLTCSLDTALGYLSNAKDIYKSMLDSCLDNIWRQLKILQFINEKRPKPNYK
IEELQCQILSRLQSQQQIKVLIIIRMDSDGEKHLLIKTLKKIEGLTLTVLRSNERKDFLE
TTSVLKGTSSCVVVHNHSIGADFPWSSFSLVVEYNHVGHSCWARHCQQLSVPFLALKAVL
PDTASLKRNTLLDRFGGFXLEIQIPYIFFASEGLLNAPEILRLLESDYDITLVERCCCES
LKLFGSTEHYGVVTVDEQTAVVVQDLEELYYEKASDNIIMRLMALSFQYNCCWIILYPKE
TLSSEYHLTEKTLHHLAQIYAALVSSGLKSEELDVKLIISPGVEETALIIRQIADHNLMT
SKRDPHEWLDKSWVEVSPSQEEMNLLDFPCINPLVAQLMLHRAPSLHWLLTASPAELQKL
LPQVPAKVLKHFCSITSLFKISCSSVSKSPQISSLQEDMTQSSPFISQSLAPVIQEHDEY
YSYEDSEEAAQEGTSSSLLELRETPYMLPSAASYSQASSWTDSVCGPNTVQNSPFLINKE
SKKVTRHSFPSQDDSESGVFSLGLTQINCGPDMLPSDTQRRVIHNFVNYPKAKGSRNMQV
STPVFLPEASHPHHCWDLKKNSGRKQIHSFSSSCGTEQTAYNKWYPQKDELPSDQPEYLS
AELEPLTYRHSTAGRERPSVPSWDSFYAPDFNVNPRGLNSLNFYQTAGNYLGQRRLHVSS
SSWGDYETPTGLMYSQVPQPKRQRLTYEKVPGRMDGQTRLRFL
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaggctttcgcccagggactggcaagcagaaaggcccccagaccttcacatc
cgggcagctggtggaccagccaagaggcggactggcctgactaaaggaggcgttgagtcc
tatttctttaagggattcactcatttcctctttcaggagcactgtcatagtgatgaaggc
tattttataatcattgtcttatgctttggctatgttggaatactcaatggcctgctgtgg
tttgggaagattgtaattcttggtgataataatctggtcttgtctatgtcgggcagaaag
acagttacaggaatgatgattaatggtacatttgaggaaattgttccaagttccaatcca
aactctccaactggaatagagaatgtcagctcgtaccccagtaaggaccacagagaagac
ttcacacctatcaagtgctccccatactaccccggagtgaaagcagagcaccaaggatta
cttattgatgaggaaatggtttttatanaaaaagccatagacaatcatctaccaactgtg
gatactctgttgagtagactaaagctctatctggttaaggatccacttttagatttcaaa
gaacagctctccggaaaggataatttcacggagtgtttctctgttcaagaacgtttggaa
ccttttgtaagagatttccatatggtggaggagaccttttgtaagaagaagctaccatct
gtttttccgtctgagtatgaattcttaatatctacaaaccccaaacaagaaattcctatt
ctaccatcatcaaaactgaaggaatcaatgtctgagataatggattatgtagatgaaaac
gaaaagctttttaaaagagatctttctaccaagcatgaatttgatactgatgatatgaaa
tgcaactccacagagatcttacctattgcaagcccacgtgaaccagagtgcaacaaacca
ggagaattagaaatatcaccaaccaatctaagcttaccaaggcaatattcttcagtgagt
tcattatgtgcaggatttcatacatttccattttctgctgtgtgtaaaattaatttgctt
agtgctggagaatcgactaatagatattgcatgctgtggcagttgggaagctgcagaaac
tcttgggtctcattcttgcttacagttccaagactccaagagcccagcggtcaatattct
cttgcagatatgaggagtatcttttctattaaaggagacagccttgtgattaaccctgca
aaagcaaagaggtggagacaagcaagactaaatccaataatggctgaaactttggagcat
ttgaaggcatatttgtgtcacaatggtctgtcttctaaggaaactaagctggagatcttt
ctgcctacaaaagtgcttcagctggaatcctggctagaacatcagagtcgacccttgccc
atcatgcctaagagtgataaatctaccaatgttcagagattacgtccacagaagagacca
tcttcagaaaaacaagtgccacatctgcttttgtctgatgaatgtgtctctgttaaaaac
ncaaaaactgaagaaaatccaaagaataaccaagaagtagcttctaaaataatgcagaac
acagacaatagtcgtgttggacttgataactctgtgccgtttgttgaaccaacttcctct
tcatggatcaaggcatcttatgataaaaaacaaaatgatttggaccttttgagtgaattt
attactctgagaagtaaagacaagccttctacttcagatgatgaagtcacaggccatgac
caaaacaatgaatttcaggataaagaaaagtgttcttcgactcttcaagaagaaagtcct
attgtttctaacaacaaaactccagaggaaagatttcaagaaaggacagatgatgtcatt
gagattcaagcatcagacacccagtgccaagcatactatctcctagaagcagcagcgact
cctgtcttaaagaagcttgcttgcctctgtacttaccctgctgctgattggaaatttgcc
actgtcatttttgaccaaacaagattcttcttaaaggaacaagaaaaaataataaatgat
gctgttcaccaaggtaaaactgatgacagagaaataacgttcaggcatgctgctttctta
catctcctggtaacaatcagagatgcccttttaacatgcagtttggacacagcattagga
tatttgtcaaatgcaaaagatatctacaaaagcatgttagactcctgcttggataacatt
tggagacagctgaaaattttacagtttattaacgaaaaaaggcctaaacccaattataag
attgaagaattacaatgtcagatactaagcaggttgcaaagtcaacaacaaattaaggta
ctgattataataagaatggactcagatggagaaaagcatttacttattaaaactcttaag
aaaatagaaggtttaacattgactgttttacgttcaaatgagagaaaagatttcctggaa
actaccagtgttttaaaaggtacaagttcctgtgtggttgtgcacaatcacagtattgga
gcagatttcccctggagcagcttctcactcgtggtggagtacaatcacgtgggacactct
tgctgggccaggcactgccagcagctgagcgtacctttcctggccctgaaagccgttctt
ccagacacagcttctctgaaaagaaacaccttgctggatagatttggtgggtttnccttg
gaaattcagatcccatacatattttttgcttctgaaggattacttaatgccccagaaata
ctccggctgctggaatctgactatgatatcacactagtggagagatgctgctgtgagtca
ctgaaactctttggaagcacagagcattatggagtggtcacagttgatgagcagactgct
gtagttgtacaggacctagaagaattatattatgagaaggcatcagacaatatcattatg
agattaatggcattgtcattccagtataactgttgttggataatactatatcccaaggaa
acattaagttcagagtaccatctcacagaaaagacacttcatcatctcgcacagatttat
gcagctttggtttcctcgggtcttaaatctgaagaactggatgtaaagcttataatttcc
ccaggtgtagaagagactgctttaataattcgacaaattgcagaccacaatttaatgacg
tcgaagagagatcctcatgagtggttggataaatcctgggttgaagtttcaccatctcag
gaagaaatgaacctacttgatttcccatgtattaacccactggtggcccagctcatgtta
cacagagctccttccctgcactggctgctgacagcatcgcccgctgagcttcagaaactc
ctaccccaggttccagccaaagtactgaagcatttttgtagcatcacctccttgttcaag
attagttgttcctctgtgtcaaagtctcctcaaatctcatcacttcaggaagatatgact
caaagtagtccctttatttctcagagtttggctcctgtcattcaagaacatgatgaatat
tattcctatgaagactctgaagaagcagctcaggaaggcacgagctcttctcttctagag
ctaagagaaacaccatacatgttgccatctgcagcatcttacagtcaggccagctcctgg
acagactctgtttgtggccctaacacagtgcagaatagcccttttctaattaataaggag
tcaaagaaagtgactcggcactcctttccaagccaggatgattcagaatcaggtgtcttc
tctctgggtctaacacaaataaattgtggacctgacatgttgccaagtgatactcagagg
agagttattcataattttgtaaattatccgaaagcaaaaggaagcagaaacatgcaggtg
tccacccctgtctttttaccagaggcttctcacccccaccattgttgggacttgaagaaa
aacagtggtaggaaacagattcattcattcagttcaagctgtggaacagaacaaactgca
tacaacaaatggtacccacaaaaagatgagttacccagtgatcagcctgagtatctgtca
gctgaattggaacccctcacatacagacattcaactgctgggagagagcggccgtctgtt
cccagctgggattcattctatgctcctgattttaatgtaaacccaagaggattgaatagc
cttaatttctaccaaacagctgggaactacttaggacagagaaggctccatgtatcttca
tccagttggggagactacgaaacaccaacaggtttaatgtactcacaagtaccacaaccc
aaaagacaacgtctaacgtatgaaaaagtccctggaagaatggatggacaaacccggctg
aggttcttatga
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integrated database retrieval system
