Phodopus roborovskii (desert hamster): 127225964
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Entry
127225964 CDS
T08852
Symbol
Shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127225964 (Shank3)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
127225964
NCBI-ProteinID:
XP_051045616
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MQLNRAAVAAAAAPAEPPEPLSPALAPAPAPPGPLPRSAVGGAPAGGQGGPGRRAESPCA
PLSAGNSPGPGASTGMDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNH
SLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDK
QFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDL
LKVLRNGGAHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSAL
GGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNT
ALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVP
FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDAQPAASPGPTLRSLPHQLLLQRL
QEEKDRDRDGEQEKDISGSSAGRGSHNKISPSGPGGAGPAPGPGPASPAPPAPPPRGPKR
KLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCV
EEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFV
LRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQ
VVGLIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELAS
IRRRKGEKLDEILAVAAEPTLRPDIADADSRAATVKQRPTSRRITPAEITSLFERQGLPG
PEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTAREGRGIPPPPQTAPPPPP
APYYFDSGPPPTFSPPPPPGRAYDTVRSSFKPGLEARLGAGATGLYDSGAPLGPLPYPER
QKRARSMIILQDSAPEMGDIPRPVPAATPPERPKRRPRPSGPDSPYANLGAFSASLFAPS
KPQRRKSPLVKQLQVEDAQERAALAVGSPGPVGGSFARDPSPTHRGPRPSGLDYGSGEGM
GLTFGGPGPGPGKERRLEERRRSTVFLSVGAIEGSPPSPDLPSLQPSRSIDERLLGTGAT
PGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQA
PSRSPTPVHSPDADRPGPLFVDVQTRDSERGPLASPAFSPRSPAWIPVPARREAEKPPRE
ERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPNRLGAEEERPGTPELAPAPMQA
TAVAEPMPSPRAQPPGSIPADSGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARI
GLVPPPEEFANGILLATPPPGPGPLPTTVPSPASGKPSSELPPAPESAADSGVEEADTRS
SSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGK
GPVTFRDPLLKQSSDSELMAQQHHAASTGLASAAGPARPRYLFQRRSKLWGDPVESRGLP
GPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGSLLDPAKKSSPIAAARLFSSLGEL
STISAQRSPGGPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGVGGAGRPFGL
TPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRPFQQKP
LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERA
LRQLDGS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaaccgtgccgccgtcgccgccgccgctgcgcctgcggagcccccggagccg
ctgtcccccgcgctggccccggccccggccccccccggccccctcccgcgcagcgcggtc
ggcggggctccggcggggggtcagggggggccagggcgccgcgcggaatccccgtgcgct
cctctttccgccggcaatagtccgggcccgggcgctagcaccgggatggacggccccggg
gccagcgccgtggtcgtgcgcgtcggcatcccggacctgcaacaaacgaagtgcctgcgt
ctggacccaaccgcgcccgtgtgggccgccaagcagcgtgtgctctgcgcccttaaccac
agccttcaggacgcgctcaactacgggctattccagccgccctcccggggtcgcgccggc
aagttcctggatgaagagcggctcttacaggactacccgcctaacctggacacgcccctg
ccctatctggagtttcgatacaagcggagagtttatgcccagaacctcatagatgacaag
cagtttgcaaagctacacacaaaggcaaacctgaagaagttcatggactatgtccagcta
cacagcacagacaaggtggcccgcctgctggacaaggggctggaccccaatttccatgac
cctgactcaggagagtgccctctgagccttgctgcacagttggacaacgccactgacctc
ctgaaggttcttcgcaatggaggtgctcacctggacttccgaacccgagatgggctaaca
gctgtccattgtgccacccgccagcggaatgcaggggcattgacgactctgctggacctg
ggggcttcacctgactacaaggacagccgcggcctgacgcccctgtaccatagtgcccta
gggggcggggatgccctctgctgcgagctgcttctccatgatcatgcacagctggggacc
actgatgagaatggctggcaagaaatccatcaggcctgccgctttggacatgtgcagcac
ttggagcacttgctgttctatggggccaacatgggtgcccagaatgcctcgggtaacaca
gccttgcacatctgtgccctctacaaccaggagagctgtgctcgtgtcctgcttttccgt
ggtgccaacaaggatgtccgcaattacaacagccagacagccttccaggtggccatcatt
gcagggaactttgagcttgctgaggtaatcaagactcacaaagactcggatgttgtacca
ttcagggaaaccccaagctatgcaaagcgacggcgtctggctggcccaagtggcttggca
tccccccggcccttacagcgctcagccagtgacatcaacttgaaaggtgatgcacagcct
gcagcttctcctgggcccactctccgaagcctccctcatcaactgctgcttcagcggctt
caggaagagaaagatcgggacagggatggtgagcaggaaaaggacatcagtggctcctca
gcaggcaggggtagccacaacaagatcagccccagcgggcctggcggagccggccccgcg
cccggccccggcccggcgtctcccgcgccccccgcgccgccgccccggggcccgaagcgg
aaactttacagtgccgtccccggccgcaagttcatcgctgtgaaggcgcacagcccgcag
ggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggggag
ggcggtttctgggagggaaccgtgaagggccgcactggctggttcccagctgactgtgtg
gaggaagtgcagatgcgacagtatgatacacggcatgaaacccgagaggaccggaccaag
cgtctctttcgtcactacactgtgggttcatatgacagcctcacttcacacagtgattat
gtcattgatgacaaggtggctatcctgcaaaaacgggaccatgagggttttggcttcgtt
ctccggggagccaaagcagagacccccattgaggagtttacacccacacctgccttccct
gcactccaataccttgagtctgtagatgtggaaggtgtagcctggagggctgggcttcga
actggggacttcctcatcgaggtgaatggagtgaatgtcgtgaaggttggacacaagcaa
gtagtgggtctcatccgtcagggtggcaaccgcctggtcatgaaagtggtgtctgtgacc
aggaaaccggaagaggatggtgctcggcgcagagccccaccacccccaaagagggccccc
agcaccacactgaccctgcgctccaagtccatgacagctgagcttgaggaactcgcttcc
attcggagaagaaaaggggaaaagttggatgagatcctggcagttgctgcggagccgaca
ctgaggccagacattgcagatgctgactccagggcagccactgtcaagcagcggcccacc
agccggaggattacccctgccgagatcacctcattgtttgagcgccagggcctcccaggc
ccagagaagctgccgggctctctgcggaaggggattccacggaccaaatctgtaggggag
gacgagaagctggcatccctactggaagggcgcttcccacgcagcacatcaatgcaggac
acagcgcgtgaaggtcgtggcattccgcccccgccgcagactgccccaccacccccaccg
gcgccctactacttcgactctgggccacctcccacattttcaccgccgccaccgcctggc
cgggcctatgacactgtgcgctccagcttcaagccaggcctggaggctcgcctgggtgcc
ggggccactggtctgtatgattctggcgcgcctttgggcccgctgccctaccctgagcgt
cagaagcgtgcccgctccatgatcatcttgcaggattcagcaccagaaatgggcgacata
ccccggcctgtgcctgcagctacaccacctgagcgccccaagcgccggcctcggccttct
ggccctgatagcccctatgccaacctgggcgccttcagtgccagcctctttgctccgtcg
aaaccacagcgccgcaagagcccgctggtgaagcagcttcaggtggaggacgctcaggag
cgtgcggccctggccgtgggtagcccgggcccagttggtggaagctttgcacgagatccc
tccccaacgcaccgggggccccggccgagtggccttgactacggctctggagaaggcatg
gggctcacatttggcggccctggccctggccccggcaaggagcggcgcctggaggagaga
cgccgttccactgtgttcctgtctgtgggtgccatcgagggcagccctcccagcccagat
ctgccatcccttcaaccctcccgctccattgatgagcgcctcctggggacaggcgcaacc
cctggccgcgatttgctgctcccctcccccgtctctgccctgaagccattggtcagtggc
cccagccttgggccctcaggctccaccttcatccaccctcttactggcaaacccttggat
cctagctcacccttagcccttgctctggctgcccgagagcgggctctggcctcgcaagca
ccttcccggtcccccacacctgtgcacagccctgatgctgaccgccctggacccctcttt
gtggatgtgcaaacccgagactctgagcgagggccgttggcttcaccagccttctctcct
cggagcccagcctggattccagtgcctgctcgcagagaggccgagaagccccctagggaa
gagaggaagtcaccagaggataagaaatccatgatcctcagcgttttggacacatccttg
cagcggccagctggtctcattgttgtgcatgccaccagcaatggacaggagcccaacagg
ctaggggctgaagaggagcgccccggtactccggagctggccccagcccccatgcaggca
acggctgtggcagagcctatgccaagtccccgggcccagccccctggcagcattccagca
gattctgggccaggccaaggtagctcagaggaggaaccagagctggtatttgctgtgaac
ctgcctcctgctcaactgtcctccagcgatgaagaaactagggaggagctggcccgcatt
gggctagtgccaccccctgaagagtttgccaatgggatcctgctggccaccccaccccct
ggaccgggtcccttgcccaccacggtacccagcccggcctcagggaagcccagcagtgag
ctgccccctgcccctgagtctgcagctgactctggagtagaggaggctgacactcgaagc
tccagtgacccccatctggagaccacaagcaccatttccacagtgtccagcatgtccacc
ctgagctcggagagtggggaactcactgacacccacacctcctttgccgatggacacact
tttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctggggaag
gggccggtgaccttcagggacccgttgctgaagcaatcctcggacagtgagctcatggcc
cagcagcaccatgctgcctctactgggttggcttctgctgctgggcctgcccgccctcgc
tacctcttccagagaaggtccaagctgtggggggaccccgtggagagtcgggggctccct
gggcctgaagatgacaagccaactgtgatcagtgagctcagctcccgtctgcagcagctg
aacaaagatacacgctccttgggggaggaaccggttggtggcctgggcagcctgctggac
cctgctaagaagtcttcgcccattgcagcagctcggctcttcagcagcctcggtgagctg
agcaccatttcagcgcagcgcagccccgggggcccgggcggaggggcctcctactcggtg
cggcccagcggccggtaccccgtggcgagacgagccccaagcccagtgaagcccgcatcg
ctggagcgggtggaggggctgggggcgggcgtgggaggcgcggggcggcccttcggcctc
acgcctcccaccatcctcaagtcgtccagcctctccatcccgcacgaacccaaggaagtg
cgcttcgtggtgcgaagtgtgagtgcgcgcagccgctccccctcgccatctccgctgccc
tcaccttctcccggctctggccccagtgccggcccgcgtaggccattccagcagaagccc
ctgcagctctggagcaagttcgatgtgggcgactggttggagagcatccacttaggcgag
caccgagaccgcttcgaggaccatgagatcgaaggcgcacacctgcctgcgctcaccaag
gacgacttcgtggagctgggcgtcacacgcgttggtcaccgcatgaacatcgagcgtgca
ctcaggcagctggatggcagctga
DBGET
integrated database retrieval system
