Phodopus roborovskii (desert hamster): 127225979
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Entry
127225979 CDS
T08852
Symbol
Cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127225979 (Cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127225979 (Cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
prob00537
]
127225979 (Cntn1)
Cell adhesion molecules [BR:
prob04515
]
Immunoglobulin superfamily
Contactins
127225979 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
prob00537
]
Others
127225979 (Cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
PLDc_N
Motif
Other DBs
NCBI-GeneID:
127225979
NCBI-ProteinID:
XP_051045657
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MEMSLLVSHLLLISAISCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
VYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVW
SFNGYVIDFNKEITHIHYQRNYMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADL
VVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPI
IEGNMEAAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGG
SNRELTITWAPLSREYHYGNNFGYIVAFKPFDGDEWKKVTVTNPDTGRYVHKDETMTPST
AFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE
SYQIRYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIEA
FTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSMLSWSLLSLLLPFLGFLLYMEF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcattgctggttagccatctcctgctaatctctgccatatcctgtctagga
gagttcacatggcacaggagatatggtcatggagtttctgaggaggacaaaggatttgga
cccatttttgaagagcaaccaatcaataccatttacccagaggagtcgctggaaggaaaa
gtttcactcaactgccgggcacgagccagcccatttccagtttacaaatggagaatgaat
aatggggatgttgacctgacaaatgaccgatacagtatggtgggaggaaaccttgtcatc
aacaaccctgataagcagaaagatgctgggatctactactgcttggcatcaaataactat
gggatggtcagaagcacagaggcgaccctgagttttggatatctcgacccttttcctcct
gaggagcgtccggaggtgaaagtgaaggaagggaagggcatggtgcttctctgtgaccct
ccgtaccactttccagatgaccttagctaccgctggctcctgaatgaatttcctgtgttt
atcacaatggacaaacgaagatttgtgtctcagaccaatggcaatctctacattgcaaac
gttgagtcttctgacagaggcaattactcctgctttgtgtccagtccttctattacaaag
agtgtgttcagcaagtttattcctctcatcccaatacctgaacgaacaacaaagccatac
cctgctgatattgtagtgcagttcaaagacatatataccatgatgggccaaaatgtgact
ttagagtgtttcgctcttggaaaccctgtccctgatatccggtggcggaaggttctagaa
cccatgcctagcactgctgagataagcacctcaggggctgtccttaagatcttcaacatt
cagttagaagatgaaggtatctatgaatgtgaagctgagaacattagagggaaggacaaa
caccaggcaagaatttatgttcaagcatttcctgaatgggtagaacatatcaatgacact
gaggtggacataggcagtgacctctactggccttgtgtggccacagggaaacctatccct
accatcagatggctgaaaaacgggtatgcgtatcacaaaggtgaactaagactctatgac
gtcacatttgaaaatgctgggatgtaccagtgcatagcagaaaatgcttatggatccatt
tatgcaaatgccgagctcaagatcctggctttagctccgacttttgaaatgaatcccatg
aagaaaaagatcctggctgctaaaggaggaagggttatcattgaatgtaaacccaaggct
gcaccaaaacccaagttttcatggagcaaagggactgagtggcttgtcaacagcagcaga
atactcatatgggaagatggtagtttggaaatcaataatattacaaggaatgatggagga
gtctatacatgctttgcagaaaataatagagggaaagccaatagcactgggactctggtg
atcacaaatcccacacgaatcattttggccccaattaatgctgatatcactgttggagaa
aatgctacgatgcaatgtgcagcatcctttgaccctgccttggatctcacatttgtttgg
tccttcaatggctacgtgattgattttaacaaagaaattacacacatccattatcagagg
aattatatgcttgatgccaacggggaactgctcatccgaaatgcccaactgaaacatgca
ggaagatacacgtgcacagcacagaccattgtggacaattcttcagcttcagctgacctt
gtggtacgaggaccgccaggccctccaggtggcttgagaatagaagatataagagctacc
tctgtggcactgacctggagccgtggttcagacaatcacagtcctatctctaaatacact
atccagaccaagaccatcctctccgatgactggaaagatgcaaagacagatcccccaatc
attgaaggaaacatggaggcagcaaaagcagtggatttaatcccatggatggagtatgaa
tttcgagtagtagcgaccaataccttaggtaccggagaacccagcataccttcaaacagg
attaaaacagatggtgctgcaccaaatgtggctccctcagatgtaggaggtgggggagga
agcaacagagagctgacaataacatgggcgcctttgtcaagagaataccattacggtaac
aattttggctacatagtggcctttaagccatttgatggagacgaatggaagaaagtgaca
gttactaacccagatactggtcgctatgtccacaaagacgaaaccatgaccccttccact
gcatttcaagtgaaagtgaaggcattcaacaataaaggagatgggccctacagcctcatc
gctgtcatcaactcagcacaagacgctcccagtgaagcccccacagaagtaggagtgaaa
gtgctgtcctcttctgagatatctgttcattggaagcatgttctagagaaaattgtggaa
agctatcagattcggtactgggctgcgcatgacaaagaagcagctgctcaccgagttcaa
gtcaccagccaggaatattcagccaggctggagaaccttctgcccgatacccagtacttc
attgaagtgggagcttgcaacagtgccgggtgtggaccttcaagtgatgtgatcgaggcc
ttcaccagaaaagccccccccagccaaccaccccggatcatcagctcggtgaggtctggc
tctcgctatataatcacatgggatcatgttgttgccctctcaaatgaatctacagtgaca
ggatacaagatactctacagacctgatggacagcatgatggaaagttgttctcaacccat
aaacactccatagaagtcccaatccccagagacggagagtatgtggttgaggttcgagca
cacagtgatgggggagatggagtagtatctcaagttaaaatttcaggtgtgtccatgctg
tcttggagtctcctcagcttgctactgcccttccttggcttccttctctacatggaattc
tga
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